RNA–Protein interactions for RNA: ENST00000558357.5

INO80-205, Transcript of INO80 complex subunit, humanhuman

TSL 1 (best)

Gene INO80, Length 5,503 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80-205ENST00000558357 IFT43Q96FT9 208 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 NDE1Q9NXR1 346 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 RNF103-CHMP3A0A140T963 221 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 GRID2IPA4D2P6 1211 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 CD2BP2O95400 341 aaKnown RBP12.08□□□□□ -0.48
INO80-205ENST00000558357 ATXN8OSP0DMR3 200 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 RC3H1Q5TC82 1133 aaKnown RBP12.08□□□□□ -0.48
INO80-205ENST00000558357 DYNLL2Q96FJ2 89 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 NAF1Q96HR8 494 aaKnown RBP12.08□□□□□ -0.48
INO80-205ENST00000558357 ATP6V0A4Q9HBG4 840 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 SEC31BQ9NQW1 1179 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 ADAM21Q9UKJ8 722 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 ABCC2Q92887 1545 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 PBRM1Q86U86 1689 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 MYO1CO00159 1063 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 AARSP49588 968 aaKnown RBP eCLIP12.08□□□□□ -0.48
INO80-205ENST00000558357 HDAC4P56524 1084 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 PPP2R2AP63151 447 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 TERF2Q15554 542 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 DGKHQ86XP1 1220 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 NEUROG2Q9H2A3 272 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 COG4Q9H9E3 785 aa12.08□□□□□ -0.48
INO80-205ENST00000558357 GMNCA6NCL1 334 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 ARHGEF9O43307 516 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 EIF2AK2P19525 551 aaKnown RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 DYNC1I2Q13409 638 aaKnown RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 EFTUD2Q15029 972 aaKnown RBP eCLIP12.07□□□□□ -0.483e-6■■■■■ 34.6
INO80-205ENST00000558357 ANO5Q75V66 913 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 EEPD1Q7L9B9 569 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 NUDCD3Q8IVD9 361 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 ZNF579Q8NAF0 562 aaKnown RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 ULK4Q96C45 1275 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 PPP1R16BQ96T49 567 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 ASPSCR1Q9BZE9 553 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 DBNDD1Q9H9R9 158 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 PPP1R12AO14974 1030 aaPredicted RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 HOXA13P31271 388 aaPredicted RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 GGCXP38435 758 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 RECQLP46063 649 aaPredicted RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 CDK8P49336 464 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 MAGOHP61326 146 aaKnown RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 SZRD1Q7Z422 152 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 MCPH1Q8NEM0 835 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 FAM167AQ96KS9 214 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 HEMGNQ9BXL5 484 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 KIF17Q9P2E2 1029 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 PRKAG2Q9UGJ0 569 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 GDAQ9Y2T3 454 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 KRT4P19013 534 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 HADHAP40939 763 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 RAP1GDS1P52306 607 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 PTK2BQ14289 1009 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 ERFEQ4G0M1 354 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 RNF219Q5W0B1 726 aaPredicted RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 CC2D1AQ6P1N0 951 aaPredicted RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 FOXP4Q8IVH2 680 aaPredicted RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 XXYLT1Q8NBI6 393 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 GANCQ8TET4 914 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 PLEKHF1Q96S99 279 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 USP17L3A6NCW0 530 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 USP17L4A6NCW7 530 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 NR3C1P04150 777 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 KCNA4P22459 653 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 ARFIP2P53365 341 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 CATSPER4Q7RTX7 472 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 USP17L1Q7RTZ2 530 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 DCAF4Q8WV16 495 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 TOPORSQ9NS56 1045 aaPredicted RBP12.07□□□□□ -0.48
INO80-205ENST00000558357 ZBTB1Q9Y2K1 713 aa12.07□□□□□ -0.48
INO80-205ENST00000558357 ARHGAP10A1A4S6 786 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 LRRC53A6NM62 1247 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 E9PMD0 336 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 LARGE1O95461 756 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 KITP10721 976 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 SLFNL1Q499Z3 407 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 LRRC31Q6UY01 552 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 THNSL1Q8IYQ7 743 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 STX18Q9P2W9 335 aaKnown RBP12.06□□□□□ -0.48
INO80-205ENST00000558357 AATKQ6ZMQ8 1374 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 ATP10AO60312 1499 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 DNMT1P26358 1616 aaKnown RBP12.06□□□□□ -0.48
INO80-205ENST00000558357 UBE4BO95155 1302 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 CLDN3O15551 220 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 CHRNA3P32297 505 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 ZNF699Q32M78 642 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 NAALADL2Q58DX5 795 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.06□□□□□ -0.48
INO80-205ENST00000558357 OLFM3Q96PB7 478 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 MTRQ99707 1265 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 BPIFA3Q9BQP9 254 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 HPCAL4Q9UM19 191 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 SUGT1Q9Y2Z0 365 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 SLC4A7Q9Y6M7 1214 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 MECOMQ03112 1051 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 HEY1Q9Y5J3 304 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 ASAP2O43150 1006 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 SRGAP2O75044 1071 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 MARK3P27448 753 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 KCNA1Q09470 495 aa12.06□□□□□ -0.48
INO80-205ENST00000558357 NECTIN1Q15223 517 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms