RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 UGCGQ16739 394 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 PAN2Q504Q3 1202 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 XKR3Q5GH77 459 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 TMEM31Q5JXX7 168 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 PPP4R3AQ6IN85 833 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 MIER3Q7Z3K6 550 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 EFHBQ8N7U6 833 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 FAM20AQ96MK3 541 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 UIMC1Q96RL1 719 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 CEP89Q96ST8 783 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 POP1Q99575 1024 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 NAP1L4Q99733 375 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 JPH2Q9BR39 696 aaPredicted RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 PHF20Q9BVI0 1012 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 TRAIPQ9BWF2 469 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 TMEM117Q9H0C3 514 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 ATP6V0A4Q9HBG4 840 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 CD320Q9NPF0 282 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 DDX25Q9UHL0 483 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 AKT3Q9Y243 479 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 LZTS1Q9Y250 596 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 PPME1Q9Y570 386 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 PCDHB12Q9Y5F1 795 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 GTF3C3Q9Y5Q9 886 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 MTCL1Q9Y4B5 1905 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 TECTAO75443 2155 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 A0A0U1RQF3 1178 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 CCDC194A0A1B0GVG4 234 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 CARNS1A5YM72 827 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 TBKBP1A7MCY6 615 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 MBTPS2O43462 519 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 CHMP2AO43633 222 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 PFKFB2O60825 505 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 DKC1O60832 514 aaKnown RBP eCLIP7.43□□□□□ -1.22
SLIRP-203ENST00000554074 TBX10O75333 385 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 STBD1O95210 358 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 EYA4O95677 639 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 EOMESO95936 686 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 ZSCAN20P17040 1043 aaPredicted RBP7.43□□□□□ -1.22
SLIRP-203ENST00000554074 DNAJB1P25685 340 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 PPM1AP35813 382 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 GATMP50440 423 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 PSMC5P62195 406 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 PLCB3Q01970 1234 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 ZP2Q05996 745 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 COASYQ13057 564 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 FAM102BQ5T8I3 360 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 NEK8Q86SG6 692 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 ZNF410Q86VK4 478 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 ECHDC2Q86YB7 292 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 ADHFE1Q8IWW8 467 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 EXOC8Q8IYI6 725 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 LRRC43Q8N309 656 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 LRRC71Q8N4P6 559 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 COLGALT1Q8NBJ5 622 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 POF1BQ8WVV4 589 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 WASF1Q92558 559 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 KHSRPQ92945 711 aaKnown RBP eCLIP7.43□□□□□ -1.22
SLIRP-203ENST00000554074 MSLNLQ96KJ4 702 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 AIFM3Q96NN9 605 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 CDCA3Q99618 268 aaPredicted RBP7.43□□□□□ -1.22
SLIRP-203ENST00000554074 LRFN3Q9BTN0 628 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 INO80BQ9C086 356 aaPredicted RBP7.43□□□□□ -1.22
SLIRP-203ENST00000554074 SLKQ9H2G2 1235 aaPredicted RBP7.43□□□□□ -1.22
SLIRP-203ENST00000554074 CWH43Q9H720 699 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 KCNMB3Q9NPA1 279 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 C11orf16Q9NQ32 467 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 TLR9Q9NR96 1032 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 CHST12Q9NRB3 414 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 RNF19AQ9NV58 838 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 DACT1Q9NYF0 836 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 SEPT9Q9UHD8 586 aaPredicted RBP7.43□□□□□ -1.22
SLIRP-203ENST00000554074 CD207Q9UJ71 328 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 MUC6Q6W4X9 2439 aa7.43□□□□□ -1.22
SLIRP-203ENST00000554074 PRR33A8MZF0 331 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 FSCN2O14926 492 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 MAFO75444 373 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 FGF18O76093 207 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 ATXN8OSP0DMR3 200 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 FGFR1P11362 822 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 SKIP12755 728 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 SFPQP23246 707 aaKnown RBP eCLIP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 SSTR3P32745 418 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 IRS1P35568 1242 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 QARSP47897 775 aaKnown RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 DNM2P50570 870 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 DLX2Q07687 328 aaPredicted RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 STK3Q13188 491 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 DUSP6Q16828 381 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 INF2Q27J81 1249 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 MTERF2Q49AM1 385 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 SPOUT1Q5T280 376 aaKnown RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 TMEM184AQ6ZMB5 413 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 EP400NLQ6ZTU2 488 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 ANO5Q75V66 913 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 TRMT1LQ7Z2T5 733 aaKnown RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 ADGRD2Q7Z7M1 963 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 ZNF598Q86UK7 904 aaKnown RBP7.42□□□□□ -1.22
SLIRP-203ENST00000554074 THNSL1Q8IYQ7 743 aa7.42□□□□□ -1.22
SLIRP-203ENST00000554074 ABI1Q8IZP0 508 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms