RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 RBM46Q8TBY0 533 aaKnown RBP16.37■□□□□ 0.21
CHFR-223ENST00000544268 GOLGA6AQ9NYA3 693 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 MCM8Q9UJA3 840 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 COL11A1P12107 1806 aaPredicted RBP16.37■□□□□ 0.21
CHFR-223ENST00000544268 SFI1A8K8P3 1242 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 DSG3P32926 999 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 CIITAP33076 1130 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 RDXP35241 583 aaKnown RBP16.37■□□□□ 0.21
CHFR-223ENST00000544268 HOXD13P35453 343 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 HSD17B4P51659 736 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 SLC12A3P55017 1021 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 COG2Q14746 738 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 B4GALNT4Q76KP1 1039 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 OTUD5Q96G74 571 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 PACSIN1Q9BY11 444 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 KCTD10Q9H3F6 313 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 COL20A1Q9P218 1284 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 PACSIN2Q9UNF0 486 aaPredicted RBP16.37■□□□□ 0.21
CHFR-223ENST00000544268 CLEC11AQ9Y240 323 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 AGPSO00116 658 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 CYP3A4P08684 503 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 SPATA31C1P0DKV0 1188 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 SCP2P22307 547 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 SSR1P43307 286 aaKnown RBP16.36■□□□□ 0.21
CHFR-223ENST00000544268 FKBP3Q00688 224 aaKnown RBP16.36■□□□□ 0.21
CHFR-223ENST00000544268 ASTE1Q2TB18 679 aaPredicted RBP16.36■□□□□ 0.21
CHFR-223ENST00000544268 Q4G0T1 1027 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 TREML2Q5T2D2 321 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 SPATS2Q86XZ4 545 aaKnown RBP16.36■□□□□ 0.21
CHFR-223ENST00000544268 ANKRD13AQ8IZ07 590 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 OTUD6BQ8N6M0 293 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 REPS2Q8NFH8 660 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 ETNPPLQ8TBG4 499 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 TSG101Q99816 390 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 RGL1Q9NZL6 768 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 SNX12Q9UMY4 172 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 ADAMTS5Q9UNA0 930 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 RIPK3Q9Y572 518 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 TARSL2A2RTX5 802 aaKnown RBP16.36■□□□□ 0.21
CHFR-223ENST00000544268 KRT18P05783 430 aaKnown RBP16.36■□□□□ 0.21
CHFR-223ENST00000544268 FDX1P10109 184 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 MYBP10242 640 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 PPP1R2P41236 205 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 MAGEA1P43355 309 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 CDK17Q00537 523 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 LRRC1Q9BTT6 524 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 PRDM16Q9HAZ2 1276 aa16.36■□□□□ 0.21
CHFR-223ENST00000544268 DMGDHQ9UI17 866 aaKnown RBP16.36■□□□□ 0.21
CHFR-223ENST00000544268 A6NNZ2 444 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 H0YHG0 523 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 ZNF76P36508 570 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 TUBB8Q3ZCM7 444 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 PREPLQ4J6C6 727 aaPredicted RBP16.35■□□□□ 0.21
CHFR-223ENST00000544268 MAP1SQ66K74 1059 aaPredicted RBP16.35■□□□□ 0.21
CHFR-223ENST00000544268 ZNF662Q6ZS27 426 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 REEP2Q9BRK0 252 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 GOLPH3Q9H4A6 298 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 GRIN2DO15399 1336 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 EML1O00423 815 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 CALRP27797 417 aaKnown RBP16.35■□□□□ 0.21
CHFR-223ENST00000544268 RNASE9P60153 205 aaKnown RBP16.35■□□□□ 0.21
CHFR-223ENST00000544268 ADAM9Q13443 819 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 C11orf91Q3C1V1 193 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 SFR1Q86XK3 245 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 ERO1BQ86YB8 467 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 KSR1Q8IVT5 923 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 FAM133AQ8N9E0 248 aa16.35■□□□□ 0.21
CHFR-223ENST00000544268 ZNF214Q9UL59 606 aaPredicted RBP16.35■□□□□ 0.21
CHFR-223ENST00000544268 IGLV3-22A0A075B6J6 115 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 SPDYE16A6NNV3 312 aaPredicted RBP16.34■□□□□ 0.21
CHFR-223ENST00000544268 TMCO5BA8MYB1 307 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 NAP1L1P55209 391 aaKnown RBP16.34■□□□□ 0.21
CHFR-223ENST00000544268 PPATQ06203 517 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 BIRC2Q13490 618 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 TMEM132BQ14DG7 1078 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 HYIQ5T013 277 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 MCF2L2Q86YR7 1114 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.34■□□□□ 0.21
CHFR-223ENST00000544268 SPDYE5A6NIY4 337 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 MYO1FO00160 1098 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 MSH4O15457 936 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 KIAA0754O94854 1291 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 FTCDO95954 541 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 SLC9A1P19634 815 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 GNGT1P63211 74 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 GHRHRQ02643 423 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 PSMD2Q13200 908 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 RAPGEF1Q13905 1077 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 SNRNP48Q6IEG0 339 aaKnown RBP16.34■□□□□ 0.21
CHFR-223ENST00000544268 TRIM59Q8IWR1 403 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 SLFN12Q8IYM2 578 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 EHBP1Q8NDI1 1231 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 PIGOQ8TEQ8 1089 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 OSBPL9Q96SU4 736 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 SH3GL2Q99962 352 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 RUSC1Q9BVN2 902 aa16.34■□□□□ 0.21
CHFR-223ENST00000544268 A0A087X0T9 212 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 KIF3CO14782 793 aa16.33■□□□□ 0.2
CHFR-223ENST00000544268 LCA5LO95447 670 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms