RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 LILRB2Q8N423 598 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 E2F7Q96AV8 911 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 CLUHP3Q96NS8 147 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 GPHA2Q96T91 129 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 SAE1Q9UBE0 346 aaPredicted RBP7.9□□□□□ -1.14
CCDC7-209ENST00000539197 REXO2Q9Y3B8 237 aaKnown RBP7.9□□□□□ -1.14
CCDC7-209ENST00000539197 RBM8AQ9Y5S9 174 aaKnown RBP7.9□□□□□ -1.14
CCDC7-209ENST00000539197 PTCH2Q9Y6C5 1203 aa7.9□□□□□ -1.14
CCDC7-209ENST00000539197 M0R2C6 588 aa7.89□□□□□ -1.15
CCDC7-209ENST00000539197 KCNQ2O43526 872 aa7.89□□□□□ -1.15
CCDC7-209ENST00000539197 RAPGEF3O95398 923 aa7.89□□□□□ -1.15
CCDC7-209ENST00000539197 MECP2P51608 486 aaKnown RBP7.89□□□□□ -1.15
CCDC7-209ENST00000539197 ADAM8P78325 824 aa7.89□□□□□ -1.15
CCDC7-209ENST00000539197 CC2D1AQ6P1N0 951 aaPredicted RBP7.89□□□□□ -1.15
CCDC7-209ENST00000539197 OTOP1Q7RTM1 612 aa7.89□□□□□ -1.15
CCDC7-209ENST00000539197 ZSWIM2Q8NEG5 633 aa7.89□□□□□ -1.15
CCDC7-209ENST00000539197 GFM2Q969S9 779 aaKnown RBP7.89□□□□□ -1.15
CCDC7-209ENST00000539197 SLC7A6OSQ96CW6 309 aaPredicted RBP7.89□□□□□ -1.15
CCDC7-209ENST00000539197 BOCQ9BWV1 1114 aa7.89□□□□□ -1.15
CCDC7-209ENST00000539197 MRPL4Q9BYD3 311 aaKnown RBP7.89□□□□□ -1.15
CCDC7-209ENST00000539197 SLC6A15Q9H2J7 730 aa7.89□□□□□ -1.15
CCDC7-209ENST00000539197 NCOA5Q9HCD5 579 aaKnown RBP7.89□□□□□ -1.15
CCDC7-209ENST00000539197 GLRX3O76003 335 aaKnown RBP7.88□□□□□ -1.15
CCDC7-209ENST00000539197 PRLP01236 227 aa7.88□□□□□ -1.15
CCDC7-209ENST00000539197 SCNN1GP51170 649 aa7.88□□□□□ -1.15
CCDC7-209ENST00000539197 LDLRAD3Q86YD5 345 aa7.88□□□□□ -1.15
CCDC7-209ENST00000539197 ANKRD53Q8N9V6 530 aa7.88□□□□□ -1.15
CCDC7-209ENST00000539197 PMFBP1Q8TBY8 1022 aa7.88□□□□□ -1.15
CCDC7-209ENST00000539197 GCDHQ92947 438 aaPredicted RBP7.88□□□□□ -1.15
CCDC7-209ENST00000539197 CLIP3Q96DZ5 547 aa7.88□□□□□ -1.15
CCDC7-209ENST00000539197 DENND2AQ9ULE3 1009 aa7.88□□□□□ -1.15
CCDC7-209ENST00000539197 PEX11BO96011 259 aa7.87□□□□□ -1.15
CCDC7-209ENST00000539197 KIF11P52732 1056 aa7.87□□□□□ -1.15
CCDC7-209ENST00000539197 SLC25A3Q00325 362 aa7.87□□□□□ -1.15
CCDC7-209ENST00000539197 GAREM2Q75VX8 874 aa7.87□□□□□ -1.15
CCDC7-209ENST00000539197 OR5AN1Q8NGI8 311 aa7.87□□□□□ -1.15
CCDC7-209ENST00000539197 THAP3Q8WTV1 239 aaPredicted RBP7.87□□□□□ -1.15
CCDC7-209ENST00000539197 ARMC5Q96C12 935 aa7.87□□□□□ -1.15
CCDC7-209ENST00000539197 BPIFB4P59827 614 aa7.86□□□□□ -1.15
CCDC7-209ENST00000539197 ROM1Q03395 351 aa7.86□□□□□ -1.15
CCDC7-209ENST00000539197 ARHGAP44Q17R89 818 aa7.86□□□□□ -1.15
CCDC7-209ENST00000539197 C2orf27AQ580R0 203 aa7.86□□□□□ -1.15
CCDC7-209ENST00000539197 MIEF2Q96C03 454 aa7.86□□□□□ -1.15
CCDC7-209ENST00000539197 GOLGA8BA8MQT2 603 aa7.85□□□□□ -1.15
CCDC7-209ENST00000539197 PTX3P26022 381 aaPredicted RBP7.85□□□□□ -1.15
CCDC7-209ENST00000539197 FNTBP49356 437 aa7.85□□□□□ -1.15
CCDC7-209ENST00000539197 CNGB1Q14028 1251 aaPredicted RBP7.85□□□□□ -1.15
CCDC7-209ENST00000539197 ZNF460Q14592 562 aa7.85□□□□□ -1.15
CCDC7-209ENST00000539197 DGKDQ16760 1214 aa7.85□□□□□ -1.15
CCDC7-209ENST00000539197 MRGPRGQ86SM5 289 aa7.85□□□□□ -1.15
CCDC7-209ENST00000539197 NKD2Q969F2 451 aaPredicted RBP7.85□□□□□ -1.15
CCDC7-209ENST00000539197 C8orf37Q96NL8 207 aa7.85□□□□□ -1.15
CCDC7-209ENST00000539197 SAMD15Q9P1V8 674 aa7.85□□□□□ -1.15
CCDC7-209ENST00000539197 UBE2QL1A1L167 161 aa7.84□□□□□ -1.15
CCDC7-209ENST00000539197 TRAF5O00463 557 aa7.84□□□□□ -1.15
CCDC7-209ENST00000539197 TCIRG1Q13488 830 aa7.84□□□□□ -1.15
CCDC7-209ENST00000539197 SLFN12LQ6IEE8 588 aa7.84□□□□□ -1.15
CCDC7-209ENST00000539197 ZCCHC8Q6NZY4 707 aaKnown RBP7.84□□□□□ -1.15
CCDC7-209ENST00000539197 Q6ZPA2 131 aa7.84□□□□□ -1.15
CCDC7-209ENST00000539197 ZNF662Q6ZS27 426 aa7.84□□□□□ -1.15
CCDC7-209ENST00000539197 DDX53Q86TM3 631 aaKnown RBP7.84□□□□□ -1.15
CCDC7-209ENST00000539197 GSPT2Q8IYD1 628 aaKnown RBP7.84□□□□□ -1.15
CCDC7-209ENST00000539197 PRRX2Q99811 253 aa7.84□□□□□ -1.15
CCDC7-209ENST00000539197 RPS6KA4O75676 772 aa7.83□□□□□ -1.16
CCDC7-209ENST00000539197 KRT4P19013 534 aa7.83□□□□□ -1.16
CCDC7-209ENST00000539197 MAN2A2P49641 1150 aa7.83□□□□□ -1.16
CCDC7-209ENST00000539197 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
CCDC7-209ENST00000539197 FAM111BQ6SJ93 734 aa7.83□□□□□ -1.16
CCDC7-209ENST00000539197 MAML3Q96JK9 1138 aa7.83□□□□□ -1.16
CCDC7-209ENST00000539197 DNAI1Q9UI46 699 aa7.83□□□□□ -1.16
CCDC7-209ENST00000539197 TNPO3Q9Y5L0 923 aaKnown RBP7.83□□□□□ -1.16
CCDC7-209ENST00000539197 PTPDC1A2A3K4 754 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 B4E1Z4 1266 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 DNAJC8O75937 253 aaPredicted RBP7.82□□□□□ -1.16
CCDC7-209ENST00000539197 HNRNPLP14866 589 aaKnown RBP eCLIP7.82□□□□□ -1.16
CCDC7-209ENST00000539197 TGM1P22735 817 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 ELAVL1Q15717 326 aaKnown RBP7.82□□□□□ -1.16
CCDC7-209ENST00000539197 PCSK4Q6UW60 755 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 CHST14Q8NCH0 376 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 MKL1Q969V6 931 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 ACSS2Q9NR19 701 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 GPRC5BQ9NZH0 403 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 KCMF1Q9P0J7 381 aa7.82□□□□□ -1.16
CCDC7-209ENST00000539197 UBA6A0AVT1 1052 aaPredicted RBP7.81□□□□□ -1.16
CCDC7-209ENST00000539197 PLD2O14939 933 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 MYBPC3Q14896 1274 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 GAGE13Q4V321 117 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 PRAMEF9Q5VWM5 478 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 ULK2Q8IYT8 1036 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 KIAA1958Q8N8K9 716 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 PGBD4Q96DM1 585 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 TUBGCP5Q96RT8 1024 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 AGAP2Q99490 1192 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 TCF25Q9BQ70 676 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 KANSL2Q9H9L4 492 aa7.81□□□□□ -1.16
CCDC7-209ENST00000539197 RAMP2O60895 175 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 FAM20BO75063 409 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 TOX4O94842 621 aa7.8□□□□□ -1.16
CCDC7-209ENST00000539197 SLC9A1P19634 815 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms