RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 TOB2Q14106 344 aaPredicted RBP26.21■■□□□ 1.79
COL27A1-208ENST00000494780 UGCGQ16739 394 aa26.21■■□□□ 1.79
COL27A1-208ENST00000494780 Q4G0T1 1027 aa26.21■■□□□ 1.79
COL27A1-208ENST00000494780 RDM1Q8NG50 284 aa26.21■■□□□ 1.79
COL27A1-208ENST00000494780 CDCA3Q99618 268 aaPredicted RBP26.21■■□□□ 1.79
COL27A1-208ENST00000494780 HCSTQ9UBK5 93 aa26.21■■□□□ 1.79
COL27A1-208ENST00000494780 PCDHA4Q9UN74 947 aa26.21■■□□□ 1.79
COL27A1-208ENST00000494780 LZTS1Q9Y250 596 aa26.21■■□□□ 1.79
COL27A1-208ENST00000494780 GPC3P51654 580 aa26.2■■□□□ 1.78
COL27A1-208ENST00000494780 ERVFC1P60507 584 aa26.2■■□□□ 1.78
COL27A1-208ENST00000494780 TBC1D8BQ0IIM8 1120 aa26.2■■□□□ 1.78
COL27A1-208ENST00000494780 HERC4Q5GLZ8 1057 aaPredicted RBP26.2■■□□□ 1.78
COL27A1-208ENST00000494780 BARX2Q9UMQ3 279 aaPredicted RBP26.2■■□□□ 1.78
COL27A1-208ENST00000494780 CYP3A7-CYP3A51PA0A087WV96 503 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 FSCN2O14926 492 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 PSMD10O75832 226 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 DEXIO95424 95 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 DARSP14868 501 aaKnown RBP26.19■■□□□ 1.78
COL27A1-208ENST00000494780 CYP3A7P24462 503 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 PLCB3Q01970 1234 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 TARBP2Q15633 366 aaKnown RBP26.19■■□□□ 1.78
COL27A1-208ENST00000494780 RNF135Q8IUD6 432 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 FAM177A1Q8N128 213 aaPredicted RBP26.19■■□□□ 1.78
COL27A1-208ENST00000494780 ZNF274Q96GC6 653 aaPredicted RBP26.19■■□□□ 1.78
COL27A1-208ENST00000494780 CASD1Q96PB1 797 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 RNF19AQ9NV58 838 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 CYP46A1Q9Y6A2 500 aa26.19■■□□□ 1.78
COL27A1-208ENST00000494780 CPLX1O14810 134 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 DUSP6Q16828 381 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 MIER3Q7Z3K6 550 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 ECHDC2Q86YB7 292 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 ABI1Q8IZP0 508 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 BLIDQ8IZY5 108 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 LRRC43Q8N309 656 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 DAGLBQ8NCG7 672 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 MRPS27Q92552 414 aaKnown RBP26.18■■□□□ 1.78
COL27A1-208ENST00000494780 SCLT1Q96NL6 688 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 PUF60Q9UHX1 559 aaKnown RBP26.18■■□□□ 1.78
COL27A1-208ENST00000494780 MUTYHQ9UIF7 546 aa26.18■■□□□ 1.78
COL27A1-208ENST00000494780 PER2O15055 1255 aa26.17■■□□□ 1.78
COL27A1-208ENST00000494780 CDC42EP1Q00587 391 aa26.17■■□□□ 1.78
COL27A1-208ENST00000494780 XKR3Q5GH77 459 aa26.17■■□□□ 1.78
COL27A1-208ENST00000494780 GALNT17Q6IS24 598 aa26.17■■□□□ 1.78
COL27A1-208ENST00000494780 LRRC55Q6ZSA7 311 aa26.17■■□□□ 1.78
COL27A1-208ENST00000494780 GJA10Q969M2 543 aa26.17■■□□□ 1.78
COL27A1-208ENST00000494780 ZNF668Q96K58 619 aaPredicted RBP26.17■■□□□ 1.78
COL27A1-208ENST00000494780 NIFKQ9BYG3 293 aaKnown RBP26.17■■□□□ 1.78
COL27A1-208ENST00000494780 USP15Q9Y4E8 981 aaPredicted RBP26.17■■□□□ 1.78
COL27A1-208ENST00000494780 M0R2N6 131 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 TDP2O95551 362 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 PPM1AP35813 382 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 CPLX2Q6PUV4 134 aaKnown RBP26.16■■□□□ 1.78
COL27A1-208ENST00000494780 KCNT2Q6UVM3 1135 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 MOXD1Q6UVY6 613 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 B3GNT9Q6UX72 402 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 NLRP7Q8WX94 980 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 MBOAT7Q96N66 472 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 ZNF558Q96NG5 402 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 TM6SF1Q9BZW5 370 aa26.16■■□□□ 1.78
COL27A1-208ENST00000494780 MUC6Q6W4X9 2439 aa26.15■■□□□ 1.78
COL27A1-208ENST00000494780 A0A0U1RQF3 1178 aa26.15■■□□□ 1.78
COL27A1-208ENST00000494780 LOC730098B7Z3J9 87 aa26.15■■□□□ 1.78
COL27A1-208ENST00000494780 EOMESO95936 686 aa26.15■■□□□ 1.78
COL27A1-208ENST00000494780 VN1R2Q8NFZ6 395 aa26.15■■□□□ 1.78
COL27A1-208ENST00000494780 DACT1Q9NYF0 836 aa26.15■■□□□ 1.78
COL27A1-208ENST00000494780 SEPT9Q9UHD8 586 aaPredicted RBP26.15■■□□□ 1.78
COL27A1-208ENST00000494780 SRGAP2BP0DMP2 458 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 KRT17Q04695 432 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 CBX2Q14781 532 aaPredicted RBP26.14■■□□□ 1.78
COL27A1-208ENST00000494780 MTERF2Q49AM1 385 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 PLPP4Q5VZY2 271 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 TMEM184AQ6ZMB5 413 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 RNF169Q8NCN4 708 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 CEP89Q96ST8 783 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 TCF25Q9BQ70 676 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 PHF7Q9BWX1 381 aaPredicted RBP26.14■■□□□ 1.78
COL27A1-208ENST00000494780 GCOM2Q9BZD3 368 aaPredicted RBP26.14■■□□□ 1.78
COL27A1-208ENST00000494780 KCNH6Q9H252 994 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 NGRNQ9NPE2 291 aaKnown RBP26.14■■□□□ 1.78
COL27A1-208ENST00000494780 ENTPD7Q9NQZ7 604 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 CHST12Q9NRB3 414 aa26.14■■□□□ 1.78
COL27A1-208ENST00000494780 IGKV6-21A0A0C4DH24 114 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 STBD1O95210 358 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 ATF7P17544 494 aaPredicted RBP26.13■■□□□ 1.77
COL27A1-208ENST00000494780 DNM2P50570 870 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 RBM10P98175 930 aaKnown RBP26.13■■□□□ 1.77
COL27A1-208ENST00000494780 DRP2Q13474 957 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 NONOQ15233 471 aaKnown RBP eCLIP26.13■■□□□ 1.77
COL27A1-208ENST00000494780 NPY5RQ15761 445 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 CLLU1OSQ5K130 101 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 ZNF598Q86UK7 904 aaKnown RBP26.13■■□□□ 1.77
COL27A1-208ENST00000494780 ETNPPLQ8TBG4 499 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 EDAQ92838 391 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 SPG21Q9NZD8 308 aa26.13■■□□□ 1.77
COL27A1-208ENST00000494780 FGFR4P22455 802 aa26.12■■□□□ 1.77
COL27A1-208ENST00000494780 KCNC3Q14003 757 aa26.12■■□□□ 1.77
COL27A1-208ENST00000494780 HFE2Q6ZVN8 426 aa26.12■■□□□ 1.77
COL27A1-208ENST00000494780 KRT25Q7Z3Z0 450 aa26.12■■□□□ 1.77
COL27A1-208ENST00000494780 SUSD6Q92537 303 aa26.12■■□□□ 1.77
COL27A1-208ENST00000494780 MFSD14AQ96MC6 490 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms