RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 MKRN4PQ13434 485 aaPredicted RBP12.55□□□□□ -0.4
SORT1-204ENST00000482236 EPHA7Q15375 998 aa12.55□□□□□ -0.4
SORT1-204ENST00000482236 TMEM132AQ24JP5 1023 aa12.55□□□□□ -0.4
SORT1-204ENST00000482236 MCTP1Q6DN14 999 aa12.55□□□□□ -0.4
SORT1-204ENST00000482236 FAM43BQ6ZT52 329 aaPredicted RBP12.55□□□□□ -0.4
SORT1-204ENST00000482236 TCP11Q8WWU5 503 aa12.55□□□□□ -0.4
SORT1-204ENST00000482236 PSPC1Q8WXF1 523 aaKnown RBP12.55□□□□□ -0.4
SORT1-204ENST00000482236 DYDC2Q96IM9 177 aa12.55□□□□□ -0.4
SORT1-204ENST00000482236 NSUN3Q9H649 340 aaKnown RBP12.55□□□□□ -0.4
SORT1-204ENST00000482236 TTC12Q9H892 705 aaPredicted RBP12.55□□□□□ -0.4
SORT1-204ENST00000482236 KCNMB3Q9NPA1 279 aa12.55□□□□□ -0.4
SORT1-204ENST00000482236 VAV3Q9UKW4 847 aa12.55□□□□□ -0.4
SORT1-204ENST00000482236 PIN4Q9Y237 131 aaKnown RBP12.55□□□□□ -0.4
SORT1-204ENST00000482236 MRPL42Q9Y6G3 142 aaKnown RBP12.55□□□□□ -0.4
SORT1-204ENST00000482236 COL6A3P12111 3177 aa12.55□□□□□ -0.4
SORT1-204ENST00000482236 PTPRSQ13332 1948 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 H3BQV1 296 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 LPXNO60711 386 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 GPR32O75388 356 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 ERLIN2O94905 339 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 SRGAP2CP0DJJ0 459 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 DARSP14868 501 aaKnown RBP12.54□□□□□ -0.4
SORT1-204ENST00000482236 POU3F3P20264 500 aaPredicted RBP12.54□□□□□ -0.4
SORT1-204ENST00000482236 KCNA5P22460 613 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 GATMP50440 423 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 NCBP1Q09161 790 aaKnown RBP12.54□□□□□ -0.4
SORT1-204ENST00000482236 EMC2Q15006 297 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 EARS2Q5JPH6 523 aaKnown RBP12.54□□□□□ -0.4
SORT1-204ENST00000482236 TMEM87AQ8NBN3 555 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 NEK9Q8TD19 979 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 MTRQ99707 1265 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 PLVAPQ9BX97 442 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 NIFKQ9BYG3 293 aaKnown RBP12.54□□□□□ -0.4
SORT1-204ENST00000482236 LMAN2LQ9H0V9 348 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 IGFLR1Q9H665 355 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 RGS18Q9NS28 235 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 TMEM161AQ9NX61 479 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 CLDND1Q9NY35 253 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 RGL1Q9NZL6 768 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 PPME1Q9Y570 386 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 COL4A3BPQ9Y5P4 624 aa12.54□□□□□ -0.4
SORT1-204ENST00000482236 MYH9P35579 1960 aaKnown RBP12.54□□□□□ -0.4
SORT1-204ENST00000482236 SIP14410 1827 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 A0A087WZ62 844 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 MGEA5O60502 916 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 CSDE1O75534 798 aaKnown RBP12.53□□□□□ -0.4
SORT1-204ENST00000482236 OR52Z1P0C646 297 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 FGFR1P11362 822 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 KCNQ1P51787 676 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 NPEPPSP55786 919 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 TFDP1Q14186 410 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 TCEAL5Q5H9L2 206 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 TTC38Q5R3I4 469 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 ZNF410Q86VK4 478 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 LRRC43Q8N309 656 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 HAS1Q92839 578 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 TMEM143Q96AN5 459 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 EIF2AK1Q9BQI3 630 aaKnown RBP12.53□□□□□ -0.4
SORT1-204ENST00000482236 FDXACB1Q9BRP7 624 aaPredicted RBP12.53□□□□□ -0.4
SORT1-204ENST00000482236 UBE2ZQ9H832 354 aaPredicted RBP12.53□□□□□ -0.4
SORT1-204ENST00000482236 ALG13Q9NP73 1137 aaKnown RBP12.53□□□□□ -0.4
SORT1-204ENST00000482236 FAM50BQ9Y247 325 aa12.53□□□□□ -0.4
SORT1-204ENST00000482236 TNFRSF10AO00220 468 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 EDIL3O43854 480 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 GAS2O43903 313 aaKnown RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 MAFO75444 373 aaPredicted RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 SKIP12755 728 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 LAG3P18627 525 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 SSTR3P32745 418 aaPredicted RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 PHKA2P46019 1235 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 RNASELQ05823 741 aaKnown RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 DRP2Q13474 957 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 BMS1Q14692 1282 aaKnown RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 ZNF174Q15697 407 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 HAUS3Q68CZ6 603 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 ANO5Q75V66 913 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 RTN4RL1Q86UN2 441 aaPredicted RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 C4orf19Q8IY42 314 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 MRPL9Q9BYD2 267 aaKnown RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 RAB34Q9BZG1 259 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 ADAMTS10Q9H324 1103 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 FOXP1Q9H334 677 aaPredicted RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 PUF60Q9UHX1 559 aaKnown RBP12.52□□□□□ -0.41
SORT1-204ENST00000482236 INPP5FQ9Y2H2 1132 aa12.52□□□□□ -0.41
SORT1-204ENST00000482236 POTEMA6NI47 508 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 GRM6O15303 877 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 NCK2O43639 380 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 USO1O60763 962 aaKnown RBP12.51□□□□□ -0.41
SORT1-204ENST00000482236 TECP42680 631 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 NDUFV1P49821 464 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 RAB27AP51159 221 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 TARBP2Q15633 366 aaKnown RBP12.51□□□□□ -0.41
SORT1-204ENST00000482236 LONRF3Q496Y0 759 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 FAM102BQ5T8I3 360 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 GLB1LQ6UWU2 654 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 NOSTRINQ8IVI9 506 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
SORT1-204ENST00000482236 KLHL23Q8NBE8 558 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms