RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 UBTFL6P0CB48 400 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 RCN2Q14257 317 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 GALNTL6Q49A17 601 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ISLR2Q6UXK2 745 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 PRUNE1Q86TP1 453 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ECHDC2Q86YB7 292 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 VGLL2Q8N8G2 317 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 LRRC57Q8N9N7 239 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ACTRT1Q8TDG2 376 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 U2AF1L4Q8WU68 220 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 PYM1Q9BRP8 204 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 MMTAG2Q9BU76 263 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ISCA1Q9BUE6 129 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 TRMT112Q9UI30 125 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ASB3Q9Y575 518 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 AKAP11Q9UKA4 1901 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 CCDC169A6NNP5 214 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 PEX11AO75192 247 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 NPTXRO95502 500 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 CYP19A1P11511 503 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 AUHQ13825 339 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 TCERG1LQ5VWI1 586 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 CGB2Q6NT52 195 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ARHGAP22Q7Z5H3 698 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ZC3H18Q86VM9 953 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 LMNTD2Q8IXW0 634 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 EIF1ADQ8N9N8 165 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 NSRP1Q9H0G5 558 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 MYLK2Q9H1R3 596 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 LUC7LQ9NQ29 371 aaKnown RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.19□□□□□ -0.462e-6■■■■□ 25.3
SEC61A1-202ENST00000424880 CEP72Q9P209 647 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 ANKIB1Q9P2G1 1089 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 WDR35Q9P2L0 1181 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 NAGPAQ9UK23 515 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 AJAP1Q9UKB5 411 aaPredicted RBP12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 TJP1Q07157 1748 aa12.19□□□□□ -0.46
SEC61A1-202ENST00000424880 RBAK-RBAKDNI3L0D1 243 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 TPBGLP0DKB5 382 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 GNAZP19086 355 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 KLC1Q07866 573 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 TMEM62Q0P6H9 643 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 EXOC3L4Q17RC7 722 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 CERKLQ49MI3 558 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 RFWD3Q6PCD5 774 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 FAM13CQ8NE31 585 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 FAM81AQ8TBF8 368 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 PIGOQ8TEQ8 1089 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 DDX12PQ92771 950 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 TGS1Q96RS0 853 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 ZBTB1Q9Y2K1 713 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 WNK3Q9BYP7 1800 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 RPL21P46778 160 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 PEX5P50542 639 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 TRIP13Q15645 432 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 DCAF17Q5H9S7 520 aaPredicted RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 RBM26Q5T8P6 1007 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 GIGYF2Q6Y7W6 1299 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 SV2BQ7L1I2 683 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 ASRGL1Q7L266 308 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 RBM41Q96IZ5 413 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 KIAA1683Q9H0B3 1180 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 SLCO1B3Q9NPD5 702 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 ZDHHC18Q9NUE0 388 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 TSPY2A6NKD2 308 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 CALB2P22676 271 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 SERPINB4P48594 390 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 KLRC3Q07444 240 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 CMPK2Q5EBM0 449 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 ZDHHC24Q6UX98 284 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 RBM46Q8TBY0 533 aaKnown RBP12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 DNAJC9Q8WXX5 260 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 CENPTQ96BT3 561 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 NGLY1Q96IV0 654 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 IFT74Q96LB3 600 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 ERP44Q9BS26 406 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 RNPEPL1Q9HAU8 725 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 PCDHA4Q9UN74 947 aa12.18□□□□□ -0.46
SEC61A1-202ENST00000424880 THSD7AQ9UPZ6 1657 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 MAGEB6P1A0A0J9YX57 407 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 ECEL1O95672 775 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 STARD3NLO95772 234 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 ALDH3A1P30838 453 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 GBP1P32455 592 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 MARCKSL1P49006 195 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 VPS41P49754 854 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 CDK5RAP3Q96JB5 506 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 FGD4Q96M96 766 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 TMEM260Q9NX78 707 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 COL4A3BPQ9Y5P4 624 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 TCRBV7S2A1N4TA0A589 114 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 SPATA31D3P0C874 917 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 GYG1P46976 350 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 TRAPPC10P48553 1259 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 SEPT2Q15019 361 aa12.17□□□□□ -0.46
SEC61A1-202ENST00000424880 KHDC1Q4VXA5 237 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms