RNA–Protein interactions for RNA: ENST00000364351.1

RNU4-40P-201, Transcript of RNA, U4 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU4-40P, Length 143 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-40P-201ENST00000364351 ZC3H6P61129 1189 aaKnown RBP6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 ELAVL1Q15717 326 aaKnown RBP6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 FAM111BQ6SJ93 734 aa6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 PCSK4Q6UW60 755 aa6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 Q6ZPA2 131 aa6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 RTN4RL1Q86UN2 441 aaPredicted RBP6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 IGSF22Q8N9C0 903 aa6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 NRDE2Q9H7Z3 1164 aa6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 GPRC5BQ9NZH0 403 aa6.96□□□□□ -1.3
RNU4-40P-201ENST00000364351 UBE2QL1A1L167 161 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 FOXN1O15353 648 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 KRT37O76014 449 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 ANTXR2P58335 489 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 ZC3H12BQ5HYM0 836 aaKnown RBP6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 NBPF6Q5VWK0 638 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 LAIR1Q6GTX8 287 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 RPUSD2Q8IZ73 545 aaKnown RBP6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 NBPF4Q96M43 638 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 FOXB1Q99853 325 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 GPR87Q9BY21 358 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 SFMBT1Q9UHJ3 866 aa6.95□□□□□ -1.3
RNU4-40P-201ENST00000364351 TMEM191CA6NGB0 347 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 FAM20BO75063 409 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 ZBTB48P10074 688 aaPredicted RBP6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 KCNA6P17658 529 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 RGS3P49796 1198 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 SLC6A3Q01959 620 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 TCIRG1Q13488 830 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 TMEM177Q53S58 311 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 CC2D1AQ6P1N0 951 aaPredicted RBP6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 ABHD17CQ6PCB6 329 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 TCF25Q9BQ70 676 aa6.94□□□□□ -1.3
RNU4-40P-201ENST00000364351 TCRBV16S1A1N1A0A5B0 115 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 ATP2B1P20020 1258 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 ROM1Q03395 351 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 TOB2Q14106 344 aaPredicted RBP6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 DGKDQ16760 1214 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 TRIM61Q5EBN2 209 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 BRAPQ7Z569 592 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 E2F7Q96AV8 911 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 BOCQ9BWV1 1114 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 XDHP47989 1333 aa6.93□□□□□ -1.3
RNU4-40P-201ENST00000364351 FAM221BA6H8Z2 402 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 NPTXRO95502 500 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 ADAM8P78325 824 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 NAALADL2Q58DX5 795 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 FKBP15Q5T1M5 1219 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 DPY19L2P1Q6NXN4 242 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 FGD2Q7Z6J4 655 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 OR5AN1Q8NGI8 311 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 HAS1Q92839 578 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 PGBD4Q96DM1 585 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 TANGO6Q9C0B7 1094 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 IL23AQ9NPF7 189 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 RCAN3Q9UKA8 241 aa6.92□□□□□ -1.3
RNU4-40P-201ENST00000364351 PRLP01236 227 aa6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 BMP5P22003 454 aa6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 PTGS2P35354 604 aa6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 RBM25P49756 843 aaKnown RBP6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 KIF11P52732 1056 aa6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 SMAD3P84022 425 aaKnown RBP6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 KRT40Q6A162 431 aa6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 ELOA2Q8IYF1 753 aaPredicted RBP6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 PLA2G15Q8NCC3 412 aa6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 DEPDC7Q96QD5 511 aa6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 CCDC9Q9Y3X0 531 aaKnown RBP6.91□□□□□ -1.3
RNU4-40P-201ENST00000364351 TRAF5O00463 557 aa6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 FNTBP49356 437 aa6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 RASA3Q14644 834 aa6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 SLFN12LQ6IEE8 588 aa6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 OTOP1Q7RTM1 612 aa6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 MRGPREQ86SM8 312 aa6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 SLC25A43Q8WUT9 341 aaPredicted RBP6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 ATXN2LQ8WWM7 1075 aaKnown RBP6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 NKD2Q969F2 451 aaPredicted RBP6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 MAML3Q96JK9 1138 aa6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 NCDNQ9UBB6 729 aa6.9□□□□□ -1.3
RNU4-40P-201ENST00000364351 TOX4O94842 621 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 GTF2F1P35269 517 aaKnown RBP eCLIP6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 RABGGTBP53611 331 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 COL10A1Q03692 680 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 GAGE13Q4V321 117 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 RABL3Q5HYI8 236 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 MB21D1Q8N884 522 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 ARL8AQ96BM9 186 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 DYDC2Q96IM9 177 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 WDR92Q96MX6 357 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 MNTQ99583 582 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 DNAJC7Q99615 494 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 MRPL4Q9BYD3 311 aaKnown RBP6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 KCMF1Q9P0J7 381 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 DNAI1Q9UI46 699 aa6.89□□□□□ -1.31
RNU4-40P-201ENST00000364351 UBA6A0AVT1 1052 aaPredicted RBP6.88□□□□□ -1.31
RNU4-40P-201ENST00000364351 KLRG2A4D1S0 409 aaPredicted RBP6.88□□□□□ -1.31
RNU4-40P-201ENST00000364351 GOLGA6L6A8MZA4 724 aa6.88□□□□□ -1.31
RNU4-40P-201ENST00000364351 M0R2C6 588 aa6.88□□□□□ -1.31
RNU4-40P-201ENST00000364351 MFAP3LO75121 409 aa6.88□□□□□ -1.31
RNU4-40P-201ENST00000364351 VSIG10L2P0DP72 767 aa6.88□□□□□ -1.31
RNU4-40P-201ENST00000364351 ARHGAP44Q17R89 818 aa6.88□□□□□ -1.31
RNU4-40P-201ENST00000364351 PRAMEF9Q5VWM5 478 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms