RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ALCAMQ13740 583 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 ZC2HC1CQ53FD0 456 aaPredicted RBP17.2■□□□□ 0.34
CTSA-202ENST00000354880 EXOC8Q8IYI6 725 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 TRPV1Q8NER1 839 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 ERO1AQ96HE7 468 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 MRFAP1L1Q96HT8 127 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 STRA6Q9BX79 667 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 RNPEPQ9H4A4 650 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 ZBTB42B2RXF5 422 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 H3BRB1 525 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 FKTNO75072 461 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 PPP1R37O75864 691 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 SMTNP53814 917 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 NCKAP1LP55160 1127 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 PPP4R3CPQ6ZMV5 832 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 IRF2BP1Q8IU81 584 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 XPO4Q9C0E2 1151 aaKnown RBP17.19■□□□□ 0.34
CTSA-202ENST00000354880 AP5M1Q9H0R1 490 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 POLR3FQ9H1D9 316 aaPredicted RBP17.19■□□□□ 0.34
CTSA-202ENST00000354880 ST6GALNAC4Q9H4F1 302 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 TUT1Q9H6E5 874 aaKnown RBP17.19■□□□□ 0.34
CTSA-202ENST00000354880 CCDC169A6NNP5 214 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 PDXKO00764 312 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 CBFA2T2O43439 604 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 FGFR1OPO95684 399 aaKnown RBP17.19■□□□□ 0.34
CTSA-202ENST00000354880 NPTX2P47972 431 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 CPT1AP50416 773 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 FKBP3Q00688 224 aaKnown RBP17.19■□□□□ 0.34
CTSA-202ENST00000354880 KCNA1Q09470 495 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 BRDTQ58F21 947 aaPredicted RBP17.19■□□□□ 0.34
CTSA-202ENST00000354880 TCP11X2Q5H9J9 407 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 ANKRD20A12PQ8NF67 263 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 SPIRE2Q8WWL2 714 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 TMEM143Q96AN5 459 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 EEF2KMTQ96G04 330 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 IFT74Q96LB3 600 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 CTAGE1Q96RT6 745 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 NTPCRQ9BSD7 190 aaKnown RBP17.19■□□□□ 0.34
CTSA-202ENST00000354880 TRAF3IP3Q9Y228 551 aa17.19■□□□□ 0.34
CTSA-202ENST00000354880 KCNJ18B7U540 433 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 SLC16A4O15374 487 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 GAS2O43903 313 aaKnown RBP17.18■□□□□ 0.34
CTSA-202ENST00000354880 DUSP11O75319 330 aaKnown RBP17.18■□□□□ 0.34
CTSA-202ENST00000354880 GTF2BQ00403 316 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 CACNB2Q08289 660 aaPredicted RBP17.18■□□□□ 0.34
CTSA-202ENST00000354880 KCNJ12Q14500 433 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 ARHGEF6Q15052 776 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 EDRF1Q3B7T1 1238 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 ZNF484Q5JVG2 852 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 HAUS6Q7Z4H7 955 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.18■□□□□ 0.34
CTSA-202ENST00000354880 FAM114A1Q8IWE2 563 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 ZNF296Q8WUU4 475 aaPredicted RBP17.18■□□□□ 0.34
CTSA-202ENST00000354880 BSNDQ8WZ55 320 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 JPH2Q9BR39 696 aaPredicted RBP17.18■□□□□ 0.34
CTSA-202ENST00000354880 KMT5AQ9NQR1 393 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 TYW1Q9NV66 732 aaKnown RBP17.18■□□□□ 0.34
CTSA-202ENST00000354880 KCNG1Q9UIX4 513 aa17.18■□□□□ 0.34
CTSA-202ENST00000354880 CALUO43852 315 aaPredicted RBP17.17■□□□□ 0.34
CTSA-202ENST00000354880 INSRRP14616 1297 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 ELNP15502 786 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 EEF1GP26641 437 aaKnown RBP17.17■□□□□ 0.34
CTSA-202ENST00000354880 CDC25BP30305 580 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 ARL2P36404 184 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 TRIM32Q13049 653 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 LRRC55Q6ZSA7 311 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 APTXQ7Z2E3 356 aaKnown RBP17.17■□□□□ 0.34
CTSA-202ENST00000354880 CREBRFQ8IUR6 639 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 KSR1Q8IVT5 923 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 TMEM161BQ8NDZ6 487 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 NAP1L5Q96NT1 182 aaPredicted RBP17.17■□□□□ 0.34
CTSA-202ENST00000354880 MAGEC2Q9UBF1 373 aaPredicted RBP17.17■□□□□ 0.34
CTSA-202ENST00000354880 LIMA1Q9UHB6 759 aaKnown RBP17.17■□□□□ 0.34
CTSA-202ENST00000354880 ZMYM2Q9UBW7 1377 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 IGKV6-21A0A0C4DH24 114 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 LRRC10BA6NIK2 292 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 SEPT4O43236 478 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 ADCY3O60266 1144 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 TPM3P06753 285 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 CNGA1P29973 690 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 MAP2K1Q02750 393 aaPredicted RBP17.17■□□□□ 0.34
CTSA-202ENST00000354880 KRT31Q15323 416 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 RAET1EQ8TD07 263 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 TRAPPC12Q8WVT3 735 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 TMEM206Q9H813 350 aa17.17■□□□□ 0.34
CTSA-202ENST00000354880 COL1A2P08123 1366 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 TGFB1I1O43294 461 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 HMGCRP04035 888 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 PRKAR2AP13861 404 aaKnown RBP17.16■□□□□ 0.34
CTSA-202ENST00000354880 HSPA6P17066 643 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 PPP2R5AQ15172 486 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 FSCN1Q16658 493 aaKnown RBP17.16■□□□□ 0.34
CTSA-202ENST00000354880 IER5Q5VY09 327 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 ZC3H3Q8IXZ2 948 aaKnown RBP17.16■□□□□ 0.34
CTSA-202ENST00000354880 ASAP3Q8TDY4 903 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 TCP11Q8WWU5 503 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 CNOT6LQ96LI5 555 aaKnown RBP17.16■□□□□ 0.34
CTSA-202ENST00000354880 CEP63Q96MT8 703 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 ACCSQ96QU6 501 aa17.16■□□□□ 0.34
CTSA-202ENST00000354880 BEGAINQ9BUH8 593 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms