RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W BLM10P43583 2143 aa3.52□□□□□ -1.85
SSL1YLR005W RPL20AP0CX23 172 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W RPL20BP0CX24 172 aaPredicted RBP3.51□□□□□ -1.85
SSL1YLR005W ERD1P16151 362 aa3.51□□□□□ -1.85
SSL1YLR005W GPI12P23797 304 aa3.51□□□□□ -1.85
SSL1YLR005W ERG9P29704 444 aa3.51□□□□□ -1.85
SSL1YLR005W ATS1P31386 333 aa3.51□□□□□ -1.85
SSL1YLR005W PTR2P32901 601 aa3.51□□□□□ -1.85
SSL1YLR005W LOT5P34234 306 aa3.51□□□□□ -1.85
SSL1YLR005W YHR097CP38809 366 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W SNM1P40993 198 aa3.51□□□□□ -1.85
SSL1YLR005W RPE1P46969 238 aa3.51□□□□□ -1.85
SSL1YLR005W YJR154WP47181 346 aa3.51□□□□□ -1.85
SSL1YLR005W MKC7P53379 596 aa3.51□□□□□ -1.85
SSL1YLR005W MET31Q03081 177 aa3.51□□□□□ -1.85
SSL1YLR005W ERB1Q04660 807 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W FAR10Q06001 478 aa3.51□□□□□ -1.85
SSL1YLR005W VPS74Q06385 345 aa3.51□□□□□ -1.85
SSL1YLR005W DIA2Q08496 732 aaPredicted RBP3.51□□□□□ -1.85
SSL1YLR005W RDR1Q08904 546 aa3.51□□□□□ -1.85
SSL1YLR005W HER1Q12276 1246 aa3.51□□□□□ -1.85
SSL1YLR005W NOP58Q12499 511 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W Q0144Q9ZZW2 109 aa3.51□□□□□ -1.85
SSL1YLR005W YHR214C-DP0CX93 97 aa3.51□□□□□ -1.85
SSL1YLR005W AAC3P18238 307 aa3.51□□□□□ -1.85
SSL1YLR005W ART10P18634 518 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W RPO26P20435 155 aa3.51□□□□□ -1.85
SSL1YLR005W REC107P21651 314 aa3.51□□□□□ -1.85
SSL1YLR005W BUB2P26448 306 aaPredicted RBP3.51□□□□□ -1.85
SSL1YLR005W IDH2P28241 369 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W SSO1P32867 290 aa3.51□□□□□ -1.85
SSL1YLR005W RSM22P36056 628 aa3.51□□□□□ -1.85
SSL1YLR005W AUR1P36107 401 aaPredicted RBP3.51□□□□□ -1.85
SSL1YLR005W RIM2P38127 377 aa3.51□□□□□ -1.85
SSL1YLR005W YMR262WP38430 313 aa3.51□□□□□ -1.85
SSL1YLR005W ATG7P38862 630 aa3.51□□□□□ -1.85
SSL1YLR005W SCS2P40075 244 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W MEP2P41948 499 aa3.51□□□□□ -1.85
SSL1YLR005W FMP32P43557 207 aa3.51□□□□□ -1.85
SSL1YLR005W GTO1P48239 356 aa3.51□□□□□ -1.85
SSL1YLR005W YGR151CP53287 111 aa3.51□□□□□ -1.85
SSL1YLR005W NOP19P53317 196 aaPredicted RBP3.51□□□□□ -1.85
SSL1YLR005W RHO4Q00246 291 aa3.51□□□□□ -1.85
SSL1YLR005W MIX14Q04341 121 aa3.51□□□□□ -1.85
SSL1YLR005W YMR111CQ04461 462 aaPredicted RBP3.51□□□□□ -1.85
SSL1YLR005W HRI1Q05905 244 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W YLR352WQ06479 807 aa3.51□□□□□ -1.85
SSL1YLR005W UAF30Q08747 228 aa3.51□□□□□ -1.85
SSL1YLR005W RPN5Q12250 445 aaKnown RBP3.51□□□□□ -1.85
SSL1YLR005W SPE4Q12455 300 aa3.51□□□□□ -1.85
SSL1YLR005W PSF1Q12488 208 aa3.51□□□□□ -1.85
SSL1YLR005W RPN13O13563 156 aa3.5□□□□□ -1.85
SSL1YLR005W YPR096CO13587 100 aa3.5□□□□□ -1.85
SSL1YLR005W GPH1P06738 902 aaKnown RBP3.5□□□□□ -1.85
SSL1YLR005W CAR2P07991 424 aaKnown RBP3.5□□□□□ -1.85
SSL1YLR005W RNA1P11745 407 aaKnown RBP3.5□□□□□ -1.85
SSL1YLR005W MAK32P23060 363 aa3.5□□□□□ -1.85
SSL1YLR005W YIM1P28625 365 aa3.5□□□□□ -1.85
SSL1YLR005W LOS1P33418 1100 aaPredicted RBP3.5□□□□□ -1.85
SSL1YLR005W YOR062CP36025 268 aa3.5□□□□□ -1.85
SSL1YLR005W CAF4P36130 643 aa3.5□□□□□ -1.85
SSL1YLR005W COS111P38308 924 aa3.5□□□□□ -1.85
SSL1YLR005W ARB1P40024 610 aaKnown RBP3.5□□□□□ -1.85
SSL1YLR005W YMR144WP40214 342 aaKnown RBP3.5□□□□□ -1.85
SSL1YLR005W FAR3P46671 204 aa3.5□□□□□ -1.85
SSL1YLR005W YJL043WP47053 257 aa3.5□□□□□ -1.85
SSL1YLR005W URB2P47108 1174 aa3.5□□□□□ -1.85
SSL1YLR005W PGU1P47180 361 aa3.5□□□□□ -1.85
SSL1YLR005W AAD10P47182 288 aa3.5□□□□□ -1.85
SSL1YLR005W UPF3P48412 387 aaKnown RBP3.5□□□□□ -1.85
SSL1YLR005W KEL2P50090 882 aa3.5□□□□□ -1.85
SSL1YLR005W TAF6P53040 516 aa3.5□□□□□ -1.85
SSL1YLR005W MSC1Q03104 513 aa3.5□□□□□ -1.85
SSL1YLR005W YDR249CQ03787 373 aa3.5□□□□□ -1.85
SSL1YLR005W YMR310CQ04867 317 aaPredicted RBP3.5□□□□□ -1.85
SSL1YLR005W GLO2Q05584 274 aa3.5□□□□□ -1.85
SSL1YLR005W SEI1Q06058 285 aa3.5□□□□□ -1.85
SSL1YLR005W HNT3Q08702 217 aa3.5□□□□□ -1.85
SSL1YLR005W SKS1Q12505 502 aa3.5□□□□□ -1.85
SSL1YLR005W BPH1P25356 2167 aa3.49□□□□□ -1.85
SSL1YLR005W ATP4P05626 244 aa3.49□□□□□ -1.85
SSL1YLR005W CBP6P07253 162 aaPredicted RBP3.49□□□□□ -1.85
SSL1YLR005W DST1P07273 309 aa3.49□□□□□ -1.85
SSL1YLR005W MET2P08465 486 aa3.49□□□□□ -1.85
SSL1YLR005W MCK1P21965 375 aaKnown RBP3.49□□□□□ -1.85
SSL1YLR005W RVS161P25343 265 aaKnown RBP3.49□□□□□ -1.85
SSL1YLR005W SSE1P32589 693 aaKnown RBP3.49□□□□□ -1.85
SSL1YLR005W YEF1P32622 495 aa3.49□□□□□ -1.85
SSL1YLR005W CAT2P32796 670 aaKnown RBP3.49□□□□□ -1.85
SSL1YLR005W TUL1P36096 758 aa3.49□□□□□ -1.85
SSL1YLR005W LIN1P38852 340 aaPredicted RBP3.49□□□□□ -1.85
SSL1YLR005W PIG2P40187 538 aa3.49□□□□□ -1.85
SSL1YLR005W YJL068CP40363 299 aa3.49□□□□□ -1.85
SSL1YLR005W BIT61P47041 543 aa3.49□□□□□ -1.85
SSL1YLR005W MAD3P47074 515 aa3.49□□□□□ -1.85
SSL1YLR005W TPC1P53257 314 aa3.49□□□□□ -1.85
SSL1YLR005W MAL12P53341 584 aa3.49□□□□□ -1.85
SSL1YLR005W INN1P53901 409 aa3.49□□□□□ -1.85
SSL1YLR005W YPL107WQ02873 248 aa3.49□□□□□ -1.85
SSL1YLR005W YDR124WQ04608 324 aa3.49□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms