RNA–Protein interactions for RNA: YIR009W

MSL1, Transcript of U2B component of U2 snRNP, yeastyeast

Gene MSL1, Length 336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSL1YIR009W NCA3P46955 337 aa1.93□□□□□ -2.1
MSL1YIR009W SSN8P47821 323 aa1.93□□□□□ -2.1
MSL1YIR009W RIB4P50861 169 aaPredicted RBP1.93□□□□□ -2.1
MSL1YIR009W VOA1P53262 265 aa1.93□□□□□ -2.1
MSL1YIR009W YGR168CP53293 376 aa1.93□□□□□ -2.1
MSL1YIR009W RET3P53600 189 aa1.93□□□□□ -2.1
MSL1YIR009W DBP6P53734 629 aaKnown RBP1.93□□□□□ -2.1
MSL1YIR009W TRM112P53738 135 aaPredicted RBP1.93□□□□□ -2.1
MSL1YIR009W YOL075CQ08234 1294 aa1.93□□□□□ -2.1
MSL1YIR009W RBD2Q12270 262 aa1.93□□□□□ -2.1
MSL1YIR009W YPR1Q12458 312 aa1.93□□□□□ -2.1
MSL1YIR009W RGS2Q99188 309 aa1.93□□□□□ -2.1
MSL1YIR009W CAR2P07991 424 aaKnown RBP1.92□□□□□ -2.1
MSL1YIR009W UGA1P17649 471 aa1.92□□□□□ -2.1
MSL1YIR009W MXR2P25566 168 aa1.92□□□□□ -2.1
MSL1YIR009W MUD1P32605 298 aaKnown RBP1.92□□□□□ -2.1
MSL1YIR009W MNS1P32906 549 aa1.92□□□□□ -2.1
MSL1YIR009W GPX2P38143 162 aa1.92□□□□□ -2.1
MSL1YIR009W ECM8P38246 354 aa1.92□□□□□ -2.1
MSL1YIR009W IML3P38265 245 aa1.92□□□□□ -2.1
MSL1YIR009W YHR131CP38835 850 aa1.92□□□□□ -2.1
MSL1YIR009W FET3P38993 636 aa1.92□□□□□ -2.1
MSL1YIR009W DSE1P40077 573 aa1.92□□□□□ -2.1
MSL1YIR009W GCD14P46959 383 aaPredicted RBP1.92□□□□□ -2.1
MSL1YIR009W SFH5P47008 294 aa1.92□□□□□ -2.1
MSL1YIR009W EMC2P47133 292 aaKnown RBP1.92□□□□□ -2.1
MSL1YIR009W YGR117CP53270 476 aa1.92□□□□□ -2.1
MSL1YIR009W MPP6P53725 186 aaPredicted RBP1.92□□□□□ -2.1
MSL1YIR009W CAF40P53829 373 aa1.92□□□□□ -2.1
MSL1YIR009W CSI1Q04368 295 aa1.92□□□□□ -2.1
MSL1YIR009W NAT4Q04751 285 aa1.92□□□□□ -2.1
MSL1YIR009W BCH1Q05029 724 aa1.92□□□□□ -2.1
MSL1YIR009W VAC14Q06708 880 aa1.92□□□□□ -2.1
MSL1YIR009W SHS1Q07657 551 aa1.92□□□□□ -2.1
MSL1YIR009W ESA1Q08649 445 aa1.92□□□□□ -2.1
MSL1YIR009W THP3Q12049 470 aaKnown RBP1.92□□□□□ -2.1
MSL1YIR009W TPT1Q12272 230 aaKnown RBP1.92□□□□□ -2.1
MSL1YIR009W YDR262WQ12331 272 aa1.92□□□□□ -2.1
MSL1YIR009W YRM1Q12340 786 aa1.92□□□□□ -2.1
MSL1YIR009W TOP2P06786 1428 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W NUP170P38181 1502 aa1.91□□□□□ -2.1
MSL1YIR009W DOP1Q03921 1698 aa1.91□□□□□ -2.1
MSL1YIR009W ADH2P00331 348 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W SAR1P20606 190 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W CSM1P25651 190 aa1.91□□□□□ -2.1
MSL1YIR009W ZUO1P32527 433 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W YEF1P32622 495 aa1.91□□□□□ -2.1
MSL1YIR009W MRPS5P33759 307 aa1.91□□□□□ -2.1
MSL1YIR009W YKL070WP36087 169 aa1.91□□□□□ -2.1
MSL1YIR009W YMR262WP38430 313 aa1.91□□□□□ -2.1
MSL1YIR009W YHK8P38776 514 aa1.91□□□□□ -2.1
MSL1YIR009W ATG7P38862 630 aa1.91□□□□□ -2.1
MSL1YIR009W SEC27P41811 889 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W WWM1P43582 211 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W YJR030CP47101 745 aa1.91□□□□□ -2.1
MSL1YIR009W MND1P53102 219 aa1.91□□□□□ -2.1
MSL1YIR009W RPN14P53196 417 aa1.91□□□□□ -2.1
MSL1YIR009W RRN9P53437 365 aa1.91□□□□□ -2.1
MSL1YIR009W YNL050CP53952 270 aa1.91□□□□□ -2.1
MSL1YIR009W HXT11P54862 567 aa1.91□□□□□ -2.1
MSL1YIR009W NUP116Q02630 1113 aa1.91□□□□□ -2.1
MSL1YIR009W RRN5Q02983 363 aa1.91□□□□□ -2.1
MSL1YIR009W ECM18Q04623 453 aa1.91□□□□□ -2.1
MSL1YIR009W RRG8Q06109 277 aa1.91□□□□□ -2.1
MSL1YIR009W GAT3Q07928 141 aa1.91□□□□□ -2.1
MSL1YIR009W RRT8Q08219 342 aa1.91□□□□□ -2.1
MSL1YIR009W DNL4Q08387 944 aaPredicted RBP1.91□□□□□ -2.1
MSL1YIR009W YPQ1Q12010 308 aa1.91□□□□□ -2.1
MSL1YIR009W PAA1Q12447 191 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W CEX1Q12453 761 aa1.91□□□□□ -2.1
MSL1YIR009W DCP1Q12517 231 aaPredicted RBP1.91□□□□□ -2.1
MSL1YIR009W MEX67Q99257 599 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W DET1Q99288 334 aaKnown RBP1.91□□□□□ -2.1
MSL1YIR009W RAD7P06779 565 aa1.9□□□□□ -2.11
MSL1YIR009W MAS2P11914 482 aa1.9□□□□□ -2.11
MSL1YIR009W UNG1P12887 359 aa1.9□□□□□ -2.11
MSL1YIR009W UTR1P21373 530 aa1.9□□□□□ -2.11
MSL1YIR009W CPR4P25334 318 aa1.9□□□□□ -2.11
MSL1YIR009W EFB1P32471 206 aaKnown RBP1.9□□□□□ -2.11
MSL1YIR009W COT1P32798 439 aa1.9□□□□□ -2.11
MSL1YIR009W TIR2P33890 251 aa1.9□□□□□ -2.11
MSL1YIR009W MCR1P36060 302 aaKnown RBP1.9□□□□□ -2.11
MSL1YIR009W YBR137WP38276 179 aa1.9□□□□□ -2.11
MSL1YIR009W YHR122WP38829 231 aa1.9□□□□□ -2.11
MSL1YIR009W YHR182WP38870 785 aa1.9□□□□□ -2.11
MSL1YIR009W LCP5P40079 357 aaPredicted RBP1.9□□□□□ -2.11
MSL1YIR009W BTT1P40314 149 aaPredicted RBP1.9□□□□□ -2.11
MSL1YIR009W UTP25P40498 721 aaKnown RBP1.9□□□□□ -2.11
MSL1YIR009W YIL029CP40538 142 aa1.9□□□□□ -2.11
MSL1YIR009W AGX1P43567 385 aa1.9□□□□□ -2.11
MSL1YIR009W LCB3P47013 409 aa1.9□□□□□ -2.11
MSL1YIR009W ABM1P47146 123 aa1.9□□□□□ -2.11
MSL1YIR009W NAS6P50086 228 aa1.9□□□□□ -2.11
MSL1YIR009W SPO19Q03029 223 aa1.9□□□□□ -2.11
MSL1YIR009W YMR181CQ03231 154 aa1.9□□□□□ -2.11
MSL1YIR009W HER2Q03557 464 aa1.9□□□□□ -2.11
MSL1YIR009W KAP95Q06142 861 aaKnown RBP1.9□□□□□ -2.11
MSL1YIR009W YLH47Q06493 454 aa1.9□□□□□ -2.11
MSL1YIR009W SAM4Q08985 325 aaKnown RBP1.9□□□□□ -2.11
MSL1YIR009W YOL107WQ12239 342 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 582.5 ms