RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W CYM1P32898 989 aa2.85□□□□□ -1.95
SEC28YIL076W ASN2P49090 572 aaKnown RBP2.85□□□□□ -1.95
SEC28YIL076W RNH201P53942 307 aa2.85□□□□□ -1.95
SEC28YIL076W NOP6Q07623 225 aaKnown RBP2.85□□□□□ -1.95
SEC28YIL076W GAT3Q07928 141 aa2.85□□□□□ -1.95
SEC28YIL076W AAD15Q08361 143 aa2.85□□□□□ -1.95
SEC28YIL076W LDB17Q12342 491 aa2.85□□□□□ -1.95
SEC28YIL076W HIR3P47171 1648 aa2.84□□□□□ -1.95
SEC28YIL076W HEM4P06174 275 aa2.84□□□□□ -1.95
SEC28YIL076W IME2P32581 645 aa2.84□□□□□ -1.95
SEC28YIL076W YDL109CQ12103 647 aa2.84□□□□□ -1.95
SEC28YIL076W MNL1P38888 796 aa2.83□□□□□ -1.96
SEC28YIL076W RMI1Q02685 241 aa2.83□□□□□ -1.96
SEC28YIL076W DDC1Q08949 612 aa2.83□□□□□ -1.96
SEC28YIL076W BUD4P47136 1447 aa2.83□□□□□ -1.96
SEC28YIL076W THO2P53552 1597 aaKnown RBP2.83□□□□□ -1.96
SEC28YIL076W AGA2P32781 87 aa2.82□□□□□ -1.96
SEC28YIL076W RRT13P40042 185 aa2.82□□□□□ -1.96
SEC28YIL076W CDH1P53197 566 aa2.82□□□□□ -1.96
SEC28YIL076W YGR015CP53208 328 aa2.82□□□□□ -1.96
SEC28YIL076W CWC22P53333 577 aaKnown RBP2.82□□□□□ -1.96
SEC28YIL076W MRX11Q03079 207 aa2.82□□□□□ -1.96
SEC28YIL076W COS9P36034 407 aa2.81□□□□□ -1.96
SEC28YIL076W SHE1P38200 338 aa2.81□□□□□ -1.96
SEC28YIL076W SHE3P38272 425 aaKnown RBP2.81□□□□□ -1.96
SEC28YIL076W SPP381P38282 291 aaPredicted RBP2.81□□□□□ -1.96
SEC28YIL076W YHR177WP38867 453 aa2.81□□□□□ -1.96
SEC28YIL076W CPR7P47103 393 aa2.81□□□□□ -1.96
SEC28YIL076W HST4P53688 370 aa2.81□□□□□ -1.96
SEC28YIL076W PEP1P32319 1579 aa2.81□□□□□ -1.96
SEC28YIL076W MDS3P53094 1487 aa2.8□□□□□ -1.96
SEC28YIL076W AUS1Q08409 1394 aa2.8□□□□□ -1.96
SEC28YIL076W RPL23AP0CX41 137 aaKnown RBP2.8□□□□□ -1.96
SEC28YIL076W RPL23BP0CX42 137 aaKnown RBP2.8□□□□□ -1.96
SEC28YIL076W ZIP1P31111 875 aa2.8□□□□□ -1.96
SEC28YIL076W SPS19P32573 292 aaKnown RBP2.8□□□□□ -1.96
SEC28YIL076W KAP104P38217 918 aaKnown RBP2.8□□□□□ -1.96
SEC28YIL076W BUD27P43573 796 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
SEC28YIL076W YJR054WP47114 497 aa2.8□□□□□ -1.96
SEC28YIL076W DIA1P54005 336 aa2.8□□□□□ -1.96
SEC28YIL076W GYL1Q04322 720 aa2.8□□□□□ -1.96
SEC28YIL076W SPE3Q12074 293 aaKnown RBP2.8□□□□□ -1.96
SEC28YIL076W RRP7P25368 297 aaPredicted RBP2.79□□□□□ -1.96
SEC28YIL076W STB1P42845 420 aa2.79□□□□□ -1.96
SEC28YIL076W REV3P14284 1504 aa2.78□□□□□ -1.96
SEC28YIL076W MIR1P23641 311 aaKnown RBP2.78□□□□□ -1.96
SEC28YIL076W PMT2P31382 759 aa2.78□□□□□ -1.96
SEC28YIL076W DBP7P36120 742 aaKnown RBP2.78□□□□□ -1.96
SEC28YIL076W YIR035CP40579 254 aa2.78□□□□□ -1.96
SEC28YIL076W MRX8Q05473 314 aa2.78□□□□□ -1.96
SEC28YIL076W YLH47Q06493 454 aa2.78□□□□□ -1.96
SEC28YIL076W IPK1Q06667 281 aa2.78□□□□□ -1.96
SEC28YIL076W RPN5Q12250 445 aaKnown RBP2.78□□□□□ -1.96
SEC28YIL076W YAL067W-AQ8TGK6 75 aa2.78□□□□□ -1.96
SEC28YIL076W RPS14AP06367 137 aaKnown RBP2.77□□□□□ -1.97
SEC28YIL076W MRPL8P22353 238 aa2.77□□□□□ -1.97
SEC28YIL076W SSE1P32589 693 aaKnown RBP2.77□□□□□ -1.97
SEC28YIL076W RCK2P38623 610 aa2.77□□□□□ -1.97
SEC28YIL076W SRP72P38688 640 aaKnown RBP2.77□□□□□ -1.97
SEC28YIL076W RPS14BP39516 138 aaKnown RBP2.77□□□□□ -1.97
SEC28YIL076W AIM23P47015 356 aa2.77□□□□□ -1.97
SEC28YIL076W SLT2Q00772 484 aa2.77□□□□□ -1.97
SEC28YIL076W CIK1Q01649 594 aa2.77□□□□□ -1.97
SEC28YIL076W APC2Q12440 853 aa2.77□□□□□ -1.97
SEC28YIL076W SMC6Q12749 1114 aa2.77□□□□□ -1.97
SEC28YIL076W XRN1P22147 1528 aaKnown RBP2.77□□□□□ -1.97
SEC28YIL076W RPL1AP0CX43 217 aaKnown RBP2.76□□□□□ -1.97
SEC28YIL076W RPL1BP0CX44 217 aaKnown RBP2.76□□□□□ -1.97
SEC28YIL076W FUS3P16892 353 aaKnown RBP2.76□□□□□ -1.97
SEC28YIL076W AST1P35183 429 aa2.76□□□□□ -1.97
SEC28YIL076W FRM2P37261 193 aa2.76□□□□□ -1.97
SEC28YIL076W TRR2P38816 342 aa2.76□□□□□ -1.97
SEC28YIL076W MLH1P38920 769 aa2.76□□□□□ -1.97
SEC28YIL076W GAS2Q06135 555 aa2.76□□□□□ -1.97
SEC28YIL076W FLO11P08640 1367 aa2.75□□□□□ -1.97
SEC28YIL076W ATG2P53855 1592 aa2.75□□□□□ -1.97
SEC28YIL076W ZRG17P53735 605 aa2.75□□□□□ -1.97
SEC28YIL076W SED5Q01590 340 aa2.75□□□□□ -1.97
SEC28YIL076W SHS1Q07657 551 aa2.75□□□□□ -1.97
SEC28YIL076W EFM4P40516 257 aa2.74□□□□□ -1.97
SEC28YIL076W LCB2P40970 561 aa2.74□□□□□ -1.97
SEC28YIL076W RPN14P53196 417 aa2.74□□□□□ -1.97
SEC28YIL076W INP2Q03824 705 aa2.74□□□□□ -1.97
SEC28YIL076W API2Q04413 109 aa2.74□□□□□ -1.97
SEC28YIL076W YOL029CQ08187 201 aa2.74□□□□□ -1.97
SEC28YIL076W PTK1P36002 662 aaPredicted RBP2.73□□□□□ -1.97
SEC28YIL076W SPO73P40031 143 aa2.73□□□□□ -1.97
SEC28YIL076W SRN2Q99176 213 aa2.73□□□□□ -1.97
SEC28YIL076W YOR338WQ99326 363 aa2.73□□□□□ -1.97
SEC28YIL076W BPT1P14772 1559 aa2.73□□□□□ -1.97
SEC28YIL076W STE2D6VTK4 431 aa2.72□□□□□ -1.97
SEC28YIL076W YKR015CP36111 568 aa2.72□□□□□ -1.97
SEC28YIL076W DET1Q99288 334 aaKnown RBP2.72□□□□□ -1.97
SEC28YIL076W VMA8P32610 256 aaKnown RBP2.71□□□□□ -1.98
SEC28YIL076W SKG6P32900 734 aaPredicted RBP2.71□□□□□ -1.98
SEC28YIL076W GGC1P38988 300 aa2.71□□□□□ -1.98
SEC28YIL076W UFE1P41834 346 aa2.71□□□□□ -1.98
SEC28YIL076W YJR030CP47101 745 aa2.71□□□□□ -1.98
SEC28YIL076W SLM3Q12093 417 aa2.71□□□□□ -1.98
SEC28YIL076W CKA2P19454 339 aa2.7□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 32.2 ms