RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W SCH9P11792 824 aaKnown RBP2.88□□□□□ -1.95
RPN9YDR427W RPL16AP26784 199 aaKnown RBP2.88□□□□□ -1.95
RPN9YDR427W SSE1P32589 693 aaKnown RBP2.88□□□□□ -1.95
RPN9YDR427W SWI3P32591 825 aa2.88□□□□□ -1.95
RPN9YDR427W SOL2P37262 315 aa2.88□□□□□ -1.95
RPN9YDR427W YBL028CP38202 106 aa2.88□□□□□ -1.95
RPN9YDR427W BMT2P38278 337 aa2.88□□□□□ -1.95
RPN9YDR427W CHL4P38907 458 aa2.88□□□□□ -1.95
RPN9YDR427W UTP6Q02354 440 aaKnown RBP2.88□□□□□ -1.95
RPN9YDR427W RPL21AQ02753 160 aaKnown RBP2.88□□□□□ -1.95
RPN9YDR427W YPL107WQ02873 248 aa2.88□□□□□ -1.95
RPN9YDR427W ECM11Q04110 302 aa2.88□□□□□ -1.95
RPN9YDR427W RPL21BQ12672 160 aaKnown RBP2.88□□□□□ -1.95
RPN9YDR427W CCH1P50077 2039 aa2.88□□□□□ -1.95
RPN9YDR427W RPL23AP0CX41 137 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W RPL23BP0CX42 137 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W RPS16AP0CX51 143 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W RPS16BP0CX52 143 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W UNG1P12887 359 aa2.87□□□□□ -1.95
RPN9YDR427W FAR1P21268 830 aa2.87□□□□□ -1.95
RPN9YDR427W UBA1P22515 1024 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W DBR1P24309 405 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W LDS1P31379 325 aa2.87□□□□□ -1.95
RPN9YDR427W ZUO1P32527 433 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W YKR015CP36111 568 aa2.87□□□□□ -1.95
RPN9YDR427W DAD2P36162 133 aa2.87□□□□□ -1.95
RPN9YDR427W ADH5P38113 351 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W YNR068CP53754 272 aa2.87□□□□□ -1.95
RPN9YDR427W FSH2Q05015 223 aa2.87□□□□□ -1.95
RPN9YDR427W PEX27Q08580 376 aa2.87□□□□□ -1.95
RPN9YDR427W AIM45Q12480 344 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W TFB5Q3E7C1 72 aaPredicted RBP2.87□□□□□ -1.95
RPN9YDR427W DET1Q99288 334 aaKnown RBP2.87□□□□□ -1.95
RPN9YDR427W SHE1P38200 338 aa2.86□□□□□ -1.95
RPN9YDR427W PEX22P39718 180 aa2.86□□□□□ -1.95
RPN9YDR427W SEC9P40357 651 aa2.86□□□□□ -1.95
RPN9YDR427W CWC22P53333 577 aaKnown RBP2.86□□□□□ -1.95
RPN9YDR427W RNY1Q02933 434 aaKnown RBP2.86□□□□□ -1.95
RPN9YDR427W YMR010WQ03687 405 aa2.86□□□□□ -1.95
RPN9YDR427W AIM33Q04516 312 aa2.86□□□□□ -1.95
RPN9YDR427W YOR376WQ08900 122 aa2.86□□□□□ -1.95
RPN9YDR427W GRR1P24814 1151 aa2.85□□□□□ -1.95
RPN9YDR427W RDS1P25611 832 aa2.85□□□□□ -1.95
RPN9YDR427W PDC2P32896 925 aa2.85□□□□□ -1.95
RPN9YDR427W LAS1P36146 502 aaPredicted RBP2.85□□□□□ -1.95
RPN9YDR427W YGR015CP53208 328 aa2.85□□□□□ -1.95
RPN9YDR427W MCH1Q07376 486 aa2.85□□□□□ -1.95
RPN9YDR427W IES4Q08561 116 aa2.85□□□□□ -1.95
RPN9YDR427W SLM3Q12093 417 aa2.85□□□□□ -1.95
RPN9YDR427W NFI1Q12216 726 aa2.85□□□□□ -1.95
RPN9YDR427W YOL085CQ99345 113 aa2.85□□□□□ -1.95
RPN9YDR427W FSH3Q99369 266 aa2.85□□□□□ -1.95
RPN9YDR427W MIR1P23641 311 aaKnown RBP2.84□□□□□ -1.95
RPN9YDR427W POT1P27796 417 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
RPN9YDR427W PMT2P31382 759 aa2.84□□□□□ -1.95
RPN9YDR427W VPH1P32563 840 aaKnown RBP2.84□□□□□ -1.95
RPN9YDR427W DTR1P38125 572 aa2.84□□□□□ -1.95
RPN9YDR427W SMP1P38128 452 aa2.84□□□□□ -1.95
RPN9YDR427W SHE3P38272 425 aaKnown RBP2.84□□□□□ -1.95
RPN9YDR427W WSC4P38739 605 aa2.84□□□□□ -1.95
RPN9YDR427W YJR054WP47114 497 aa2.84□□□□□ -1.95
RPN9YDR427W EFM3P47163 339 aa2.84□□□□□ -1.95
RPN9YDR427W FLC3P53121 802 aa2.84□□□□□ -1.95
RPN9YDR427W MPS2P53159 387 aa2.84□□□□□ -1.95
RPN9YDR427W YDR115WQ04598 105 aa2.84□□□□□ -1.95
RPN9YDR427W RAX2Q12465 1220 aa2.84□□□□□ -1.95
RPN9YDR427W THR4P16120 514 aaKnown RBP2.83□□□□□ -1.96
RPN9YDR427W PHO84P25297 587 aaKnown RBP2.83□□□□□ -1.96
RPN9YDR427W YHR182WP38870 785 aa2.83□□□□□ -1.96
RPN9YDR427W SNL1P40548 159 aa2.83□□□□□ -1.96
RPN9YDR427W YFL012WP43580 148 aa2.83□□□□□ -1.96
RPN9YDR427W AIM23P47015 356 aa2.83□□□□□ -1.96
RPN9YDR427W ATP22P50273 684 aaPredicted RBP2.83□□□□□ -1.96
RPN9YDR427W YOL075CQ08234 1294 aa2.83□□□□□ -1.96
RPN9YDR427W LDB17Q12342 491 aa2.83□□□□□ -1.96
RPN9YDR427W UBA3Q99344 299 aa2.83□□□□□ -1.96
RPN9YDR427W PUT4P15380 627 aa2.82□□□□□ -1.96
RPN9YDR427W CKI1P20485 582 aa2.82□□□□□ -1.96
RPN9YDR427W COS9P36034 407 aa2.82□□□□□ -1.96
RPN9YDR427W YBR241CP38142 488 aa2.82□□□□□ -1.96
RPN9YDR427W SIF2P38262 535 aa2.82□□□□□ -1.96
RPN9YDR427W RCK2P38623 610 aa2.82□□□□□ -1.96
RPN9YDR427W YHR122WP38829 231 aa2.82□□□□□ -1.96
RPN9YDR427W RPA34P47006 233 aaPredicted RBP2.82□□□□□ -1.96
RPN9YDR427W BIO3P50277 480 aa2.82□□□□□ -1.96
RPN9YDR427W CDH1P53197 566 aa2.82□□□□□ -1.96
RPN9YDR427W LST7P53237 242 aa2.82□□□□□ -1.96
RPN9YDR427W YNL143CP53908 130 aa2.82□□□□□ -1.96
RPN9YDR427W RNH201P53942 307 aa2.82□□□□□ -1.96
RPN9YDR427W SLT2Q00772 484 aa2.82□□□□□ -1.96
RPN9YDR427W RMI1Q02685 241 aa2.82□□□□□ -1.96
RPN9YDR427W TRM82Q03774 444 aa2.82□□□□□ -1.96
RPN9YDR427W GAS2Q06135 555 aa2.82□□□□□ -1.96
RPN9YDR427W DBP9Q06218 594 aaKnown RBP2.82□□□□□ -1.96
RPN9YDR427W FRE8Q12209 686 aa2.82□□□□□ -1.96
RPN9YDR427W TIR4Q12218 487 aaPredicted RBP2.82□□□□□ -1.96
RPN9YDR427W YOR012WQ12351 137 aa2.82□□□□□ -1.96
RPN9YDR427W FAB1P34756 2278 aa2.82□□□□□ -1.96
RPN9YDR427W ASP3-2P0CX77 362 aa2.81□□□□□ -1.96
RPN9YDR427W ASP3-3P0CX78 362 aa2.81□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 57.1 ms