RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeastyeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE9YDR393W TRR2P38816 342 aa1.95□□□□□ -2.1
SHE9YDR393W MMF1P40185 145 aaKnown RBP1.95□□□□□ -2.1
SHE9YDR393W ZIM17P42844 174 aa1.95□□□□□ -2.1
SHE9YDR393W VEL1P53058 206 aa1.95□□□□□ -2.1
SHE9YDR393W SPR6Q01684 191 aa1.95□□□□□ -2.1
SHE9YDR393W YDR131CQ03899 556 aa1.95□□□□□ -2.1
SHE9YDR393W ISA2Q12425 185 aa1.95□□□□□ -2.1
SHE9YDR393W POM152P39685 1337 aa1.95□□□□□ -2.1
SHE9YDR393W TY1B-JR2P47100 1755 aaKnown RBP1.94□□□□□ -2.1
SHE9YDR393W TY1B-ER2Q03619 1755 aa1.94□□□□□ -2.1
SHE9YDR393W TY1B-MR1Q04214 1755 aa1.94□□□□□ -2.1
SHE9YDR393W TY1B-MR2Q04670 1755 aaKnown RBP1.94□□□□□ -2.1
SHE9YDR393W TY1B-LR1Q12088 1755 aaKnown RBP1.94□□□□□ -2.1
SHE9YDR393W TY1B-NL1Q12112 1755 aa1.94□□□□□ -2.1
SHE9YDR393W TY1B-GR1Q12141 1755 aa1.94□□□□□ -2.1
SHE9YDR393W TY1B-BLQ12490 1755 aa1.94□□□□□ -2.1
SHE9YDR393W ARO1P08566 1588 aaKnown RBP1.94□□□□□ -2.1
SHE9YDR393W BUD3P25558 1636 aa1.94□□□□□ -2.1
SHE9YDR393W IQG1Q12280 1495 aa1.94□□□□□ -2.1
SHE9YDR393W VTH1P40438 1549 aa1.94□□□□□ -2.1
SHE9YDR393W VTH2P40890 1549 aa1.94□□□□□ -2.1
SHE9YDR393W YPR096CO13587 100 aa1.94□□□□□ -2.1
SHE9YDR393W CDC21P06785 304 aa1.94□□□□□ -2.1
SHE9YDR393W RPC53P25441 422 aa1.94□□□□□ -2.1
SHE9YDR393W HEL1P36113 551 aa1.94□□□□□ -2.1
SHE9YDR393W ZTA1P38230 334 aaKnown RBP1.94□□□□□ -2.1
SHE9YDR393W KEG1P43614 200 aa1.94□□□□□ -2.1
SHE9YDR393W YGR117CP53270 476 aa1.94□□□□□ -2.1
SHE9YDR393W RMT2Q03305 412 aa1.94□□□□□ -2.1
SHE9YDR393W YDR115WQ04598 105 aa1.94□□□□□ -2.1
SHE9YDR393W DDC1Q08949 612 aa1.94□□□□□ -2.1
SHE9YDR393W ULS1Q08562 1619 aa1.94□□□□□ -2.1
SHE9YDR393W SPO14P36126 1683 aa1.93□□□□□ -2.1
SHE9YDR393W TOA1P32773 286 aa1.93□□□□□ -2.1
SHE9YDR393W FRM2P37261 193 aa1.93□□□□□ -2.1
SHE9YDR393W INM1P38710 295 aa1.93□□□□□ -2.1
SHE9YDR393W LSM12P38828 187 aaKnown RBP1.93□□□□□ -2.1
SHE9YDR393W STN1P38960 494 aa1.93□□□□□ -2.1
SHE9YDR393W SER3P40054 469 aa1.93□□□□□ -2.1
SHE9YDR393W TCB2P48231 1178 aa1.93□□□□□ -2.1
SHE9YDR393W YGR111WP53265 400 aa1.93□□□□□ -2.1
SHE9YDR393W TRM112P53738 135 aaPredicted RBP1.93□□□□□ -2.1
SHE9YDR393W PRP38Q00723 242 aaPredicted RBP1.93□□□□□ -2.1
SHE9YDR393W FAR10Q06001 478 aa1.93□□□□□ -2.1
SHE9YDR393W ECM7Q06200 448 aa1.93□□□□□ -2.1
SHE9YDR393W YOR376WQ08900 122 aa1.93□□□□□ -2.1
SHE9YDR393W RPO21P04050 1733 aaKnown RBP1.93□□□□□ -2.1
SHE9YDR393W SMC4Q12267 1418 aa1.92□□□□□ -2.1
SHE9YDR393W GDB1Q06625 1536 aa1.92□□□□□ -2.1
SHE9YDR393W DNF3Q12674 1656 aa1.92□□□□□ -2.1
SHE9YDR393W ALG1P16661 449 aa1.92□□□□□ -2.1
SHE9YDR393W MDH1P17505 334 aaKnown RBP RIP-Chip data1.92□□□□□ -2.1not detected
SHE9YDR393W ZIP1P31111 875 aa1.92□□□□□ -2.1
SHE9YDR393W SKT5P34226 696 aa1.92□□□□□ -2.1
SHE9YDR393W HEM14P40012 539 aa1.92□□□□□ -2.1
SHE9YDR393W YLR177WQ06251 628 aa1.92□□□□□ -2.1
SHE9YDR393W NSE1Q07913 336 aa1.92□□□□□ -2.1
SHE9YDR393W DCI1Q08558 271 aa1.92□□□□□ -2.1
SHE9YDR393W AUS1Q08409 1394 aa1.92□□□□□ -2.1
SHE9YDR393W TRM3Q07527 1436 aa1.92□□□□□ -2.1
SHE9YDR393W STU1P38198 1513 aa1.91□□□□□ -2.1
SHE9YDR393W PAB1P04147 577 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SHE9YDR393W PDE2P06776 526 aa1.91□□□□□ -2.1
SHE9YDR393W SLM5P25345 492 aaKnown RBP1.91□□□□□ -2.1
SHE9YDR393W DOA1P36037 715 aa1.91□□□□□ -2.1
SHE9YDR393W MCR1P36060 302 aaKnown RBP1.91□□□□□ -2.1
SHE9YDR393W ECM8P38246 354 aa1.91□□□□□ -2.1
SHE9YDR393W ATM1P40416 690 aa1.91□□□□□ -2.1
SHE9YDR393W COS4P43542 379 aa1.91□□□□□ -2.1
SHE9YDR393W VAC7P53950 1165 aa1.91□□□□□ -2.1
SHE9YDR393W YDR341CQ05506 607 aaKnown RBP1.91□□□□□ -2.1
SHE9YDR393W YLR456WQ06199 204 aa1.91□□□□□ -2.1
SHE9YDR393W MYO4P32492 1471 aa1.91□□□□□ -2.1
SHE9YDR393W USO1P25386 1790 aa1.9□□□□□ -2.1
SHE9YDR393W TPK3P05986 398 aa1.9□□□□□ -2.11
SHE9YDR393W ARF1P11076 181 aaKnown RBP1.9□□□□□ -2.11
SHE9YDR393W SCH9P11792 824 aaKnown RBP1.9□□□□□ -2.11
SHE9YDR393W FAD1P38913 306 aa1.9□□□□□ -2.11
SHE9YDR393W STE24P47154 453 aa1.9□□□□□ -2.11
SHE9YDR393W MSC3Q05812 728 aa1.9□□□□□ -2.11
SHE9YDR393W UAF30Q08747 228 aa1.9□□□□□ -2.11
SHE9YDR393W SRO7Q12038 1033 aa1.9□□□□□ -2.11
SHE9YDR393W YOP1Q12402 180 aa1.9□□□□□ -2.11
SHE9YDR393W STH1P32597 1359 aa1.9□□□□□ -2.11
SHE9YDR393W YOR1P53049 1477 aa1.9□□□□□ -2.11
SHE9YDR393W SNQ2P32568 1501 aaKnown RBP1.9□□□□□ -2.11
SHE9YDR393W TY3B-GQ99315 1547 aa1.9□□□□□ -2.11
SHE9YDR393W FUS3P16892 353 aaKnown RBP1.89□□□□□ -2.11
SHE9YDR393W EPT1P22140 391 aa1.89□□□□□ -2.11
SHE9YDR393W PHO91P27514 894 aa1.89□□□□□ -2.11
SHE9YDR393W UTR5P32630 166 aa1.89□□□□□ -2.11
SHE9YDR393W NRP1P32770 719 aaKnown RBP RIP-Chip data1.89□□□□□ -2.11not detected
SHE9YDR393W SPO23P33757 523 aa1.89□□□□□ -2.11
SHE9YDR393W LTV1P34078 463 aa1.89□□□□□ -2.11
SHE9YDR393W GEP4P38812 185 aa1.89□□□□□ -2.11
SHE9YDR393W GPI16P38875 610 aa1.89□□□□□ -2.11
SHE9YDR393W PRP3Q03338 469 aaPredicted RBP1.89□□□□□ -2.11
SHE9YDR393W YMR010WQ03687 405 aa1.89□□□□□ -2.11
SHE9YDR393W INP2Q03824 705 aa1.89□□□□□ -2.11
SHE9YDR393W MRX8Q05473 314 aa1.89□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms