RNA–Protein interactions for RNA: YAL014C

SYN8, Transcript of Endosomal SNARE related to mammalian syntaxin 8, yeast

Gene SYN8, Length 768 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SYN8	YAL014C	COS111	P38308	924 aa		5	□□□□□ -1.61
SYN8	YAL014C	AIM2	P39721	246 aa		5	□□□□□ -1.61
SYN8	YAL014C	MET18	P40469	1032 aa		5	□□□□□ -1.61
SYN8	YAL014C	AIM22	P47051	409 aa		5	□□□□□ -1.61
SYN8	YAL014C	URB2	P47108	1174 aa		5	□□□□□ -1.61
SYN8	YAL014C	YGR079W	P53249	370 aa		5	□□□□□ -1.61
SYN8	YAL014C	MAL13	P53338	473 aa		5	□□□□□ -1.61
SYN8	YAL014C	YLR460C	P54007	376 aa		5	□□□□□ -1.61
SYN8	YAL014C	RHO4	Q00246	291 aa		5	□□□□□ -1.61
SYN8	YAL014C	ACS1	Q01574	713 aa		5	□□□□□ -1.61
SYN8	YAL014C	GAS2	Q06135	555 aa		5	□□□□□ -1.61
SYN8	YAL014C	SLF1	Q12034	447 aa	Known RBP	5	□□□□□ -1.61
SYN8	YAL014C	POM34	Q12445	299 aa		5	□□□□□ -1.61
SYN8	YAL014C	SKS1	Q12505	502 aa		5	□□□□□ -1.61
SYN8	YAL014C	YOL087C	Q99247	1116 aa		5	□□□□□ -1.61
SYN8	YAL014C	ARF1	P11076	181 aa	Known RBP	4.99	□□□□□ -1.61
SYN8	YAL014C	REC107	P21651	314 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	CWH43	P25618	953 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	BUB2	P26448	306 aa	Predicted RBP	4.99	□□□□□ -1.61
SYN8	YAL014C	ATS1	P31386	333 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	HSP150	P32478	413 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	TUL1	P36096	758 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	AIM3	P38266	947 aa	Known RBP	4.99	□□□□□ -1.61
SYN8	YAL014C	HSM3	P38348	480 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	PUG1	P40100	303 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	SOK1	P40317	901 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	JEM1	P40358	645 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	BNA1	P47096	177 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	HOS2	P53096	452 aa	Predicted RBP	4.99	□□□□□ -1.61
SYN8	YAL014C	YNL058C	P53947	316 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	SLM2	P53955	656 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	YPL071C	Q02864	156 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	EFR3	Q03653	782 aa	Known RBP	4.99	□□□□□ -1.61
SYN8	YAL014C	USA1	Q03714	838 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	GMC2	Q06201	188 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	YPR172W	Q06608	200 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	YOL019W	Q08157	551 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	YOR365C	Q08844	703 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	PSF1	Q12488	208 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	YKL033W-A	Q86ZR7	236 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	YOS9	Q99220	542 aa		4.99	□□□□□ -1.61
SYN8	YAL014C	RPB5	P20434	215 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	MCK1	P21965	375 aa	Known RBP	4.98	□□□□□ -1.61
SYN8	YAL014C	YCL049C	P25577	312 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	TPO5	P36029	618 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	RIM2	P38127	377 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	YBR062C	P38239	180 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	YBR138C	P38277	524 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	YLF2	P38746	405 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
SYN8	YAL014C	SEC31	P38968	1273 aa	Known RBP	4.98	□□□□□ -1.61
SYN8	YAL014C	MNN5	P46982	586 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	KEL2	P50090	882 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	LSC1	P53598	329 aa	Known RBP	4.98	□□□□□ -1.61
SYN8	YAL014C	RCF2	P53721	224 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	TRI1	Q05024	226 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	FAR10	Q06001	478 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	TMA10	Q06177	86 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	FDH1	Q08911	376 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	NOP58	Q12499	511 aa	Known RBP	4.98	□□□□□ -1.61
SYN8	YAL014C	SFG1	Q12507	346 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	TAD3	Q9URQ3	322 aa		4.98	□□□□□ -1.61
SYN8	YAL014C	SOD2	P00447	233 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	CBS2	P14905	389 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	ERD1	P16151	362 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	GAS1	P22146	559 aa	Known RBP	4.97	□□□□□ -1.61
SYN8	YAL014C	RAD51	P25454	400 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	YIM1	P28625	365 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	SEC17	P32602	292 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	SNU114	P36048	1008 aa	Known RBP	4.97	□□□□□ -1.61
SYN8	YAL014C	BZZ1	P38822	633 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	LIN1	P38852	340 aa	Predicted RBP	4.97	□□□□□ -1.61
SYN8	YAL014C	LIA1	P47120	325 aa	Known RBP	4.97	□□□□□ -1.61
SYN8	YAL014C	PGU1	P47180	361 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	GTO1	P48239	356 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	RPS12	P48589	143 aa	Known RBP	4.97	□□□□□ -1.61
SYN8	YAL014C	NOP19	P53317	196 aa	Predicted RBP	4.97	□□□□□ -1.61
SYN8	YAL014C	MEP3	P53390	489 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	IDP3	P53982	420 aa	Known RBP	4.97	□□□□□ -1.61
SYN8	YAL014C	VPS60	Q03390	229 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	PLM2	Q04383	521 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	SMA2	Q04658	369 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	ENB1	Q08299	606 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	RRG7	Q08774	242 aa	Predicted RBP	4.97	□□□□□ -1.61
SYN8	YAL014C	RDR1	Q08904	546 aa		4.97	□□□□□ -1.61
SYN8	YAL014C	CBP2	P03874	630 aa	Predicted RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	YHR214C-D	P0CX93	97 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	RPO26	P20435	155 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	KGD1	P20967	1014 aa	Known RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	GFD2	P25370	566 aa	Known RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	CAT2	P32796	670 aa	Known RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	LOS1	P33418	1100 aa	Predicted RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	MTR2	P34232	184 aa	Known RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	LOT5	P34234	306 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	LYS12	P40495	371 aa	Known RBP	4.96	□□□□□ -1.62
SYN8	YAL014C	YIL077C	P40508	320 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	REE1	P40893	198 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	PTR3	P43606	678 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	BUL1	P48524	976 aa		4.96	□□□□□ -1.62
SYN8	YAL014C	IRC15	Q02733	499 aa		4.96	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms