RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 PLIN2Q99541 437 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 NDFIP2Q9NV92 336 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ANAPC2Q9UJX6 822 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 K7ERI5 159 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 HOXB7P09629 217 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 CENPAP49450 140 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ARL4CP56559 192 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SGCGQ13326 291 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 FAM117BQ6P1L5 589 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 SUN3Q8TAQ9 357 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 ARMC7Q9H6L4 198 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MAGEF1Q9HAY2 307 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 MROH7Q68CQ1 1323 aa6.73□□□□□ -1.33
CDKL5-205ENST00000623535 A0A1B0GUL7 405 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CFAP69A5D8W1 941 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 HARS2P49590 506 aaKnown RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 MMP14P50281 582 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 COPS7BQ9H9Q2 264 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ZNF532Q9HCE3 1301 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ABCC10Q5T3U5 1492 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TARSL2A2RTX5 802 aaKnown RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 SRBD1Q8N5C6 995 aaKnown RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ZNF304Q9HCX3 659 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L15C9J2P7 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L13C9JLJ4 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L11C9JVI0 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L18D6R9N7 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L22D6RA61 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L17D6RBQ6 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L19D6RCP7 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L20D6RJB6 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 AP3B1O00203 1094 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 USP17L24Q0WX57 530 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CYB5D1Q6P9G0 228 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 KIF17Q9P2E2 1029 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 SCOCQ9UIL1 159 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ESPNB1AK53 854 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 IMPDH2P12268 514 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ARHGAP44Q17R89 818 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 PHACTR4Q8IZ21 702 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 MCPH1Q8NEM0 835 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CRELD1Q96HD1 420 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ACTR5Q9H9F9 607 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 PLEKHG2Q9H7P9 1386 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ATP1A2P50993 1020 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 NFIAQ12857 509 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TUBB2AQ13885 445 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TCP11X2Q5H9J9 407 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 KRT77Q7Z794 578 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 HOMEZQ8IX15 550 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TUBB2BQ9BVA1 445 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 KIAA1586Q9HCI6 787 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ZNF667Q5HYK9 610 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 SYDE2Q5VT97 1194 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ICE2Q659A1 982 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ITPRIPL1Q6GPH6 555 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TEX2Q8IWB9 1127 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 VPS37AQ8NEZ2 397 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 SPIRE2Q8WWL2 714 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ARMCX3Q9UH62 379 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CCL15-CCL14A0A0B4J2E2 113 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 NSUN2Q08J23 767 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CCL15Q16663 113 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TNIP3Q96KP6 325 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 MPP6Q9NZW5 540 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 RALGAPBQ86X10 1494 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 BTBD18B2RXH4 712 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CES2O00748 559 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 UQCRBP14927 111 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TJAP1Q5JTD0 557 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CABP7Q86V35 215 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 PLEKHM2Q8IWE5 1019 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 NAF1Q96HR8 494 aaKnown RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CDK5RAP1Q96SZ6 601 aaKnown RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CCDC134Q9H6E4 229 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TXLNGQ9NUQ3 528 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ELOVL2Q9NXB9 296 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ZFYVE9O95405 1425 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ARAP1Q96P48 1450 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 MANSC4A6NHS7 340 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 AP1G2O75843 785 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 AVPR1AP37288 418 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 PTPN9P43378 593 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CUL4AQ13619 759 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TEAD4Q15561 434 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 FSCBQ5H9T9 825 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 GPRC5AQ8NFJ5 357 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CDCA7LQ96GN5 454 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 MAGEB10Q96LZ2 347 aaPredicted RBP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 KCNA1Q09470 495 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 TAS2R42Q7RTR8 314 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.72□□□□□ -1.33
CDKL5-205ENST00000623535 XAGE2Q96GT9 111 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 BBS4Q96RK4 519 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 MUC3BQ9H195 1237 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ACAD9Q9H845 621 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 STARD7Q9NQZ5 370 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 ATP6V1HQ9UI12 483 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 SNX6Q9UNH7 406 aa6.72□□□□□ -1.33
CDKL5-205ENST00000623535 CTNND2Q9UQB3 1225 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms