RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 CHMP2AO43633 222 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 GPR32O75388 356 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 TDP2O95551 362 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 GTF2F1P35269 517 aaKnown RBP eCLIP17.12■□□□□ 0.33
TGFB1-202ENST00000597453 USP11P51784 963 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 DLX2Q07687 328 aaPredicted RBP17.12■□□□□ 0.33
TGFB1-202ENST00000597453 STK3Q13188 491 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 NPY5RQ15761 445 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 CTC1Q2NKJ3 1217 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 GJD3Q8N144 294 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 KLHL23Q8NBE8 558 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 ZNF274Q96GC6 653 aaPredicted RBP17.12■□□□□ 0.33
TGFB1-202ENST00000597453 FAM167AQ96KS9 214 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 RIT2Q99578 217 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 UNC45AQ9H3U1 944 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 DISC1Q9NRI5 854 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 PDRG1Q9NUG6 133 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 CEP131Q9UPN4 1083 aa17.12■□□□□ 0.33
TGFB1-202ENST00000597453 C5orf42Q9H799 3197 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 DENND3A2RUS2 1198 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 C9IYK1 514 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 M0R2N6 131 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 GPR182O15218 404 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 GAS7O60861 476 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 DEXIO95424 95 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 OATP04181 439 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 IRS1P35568 1242 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 PRKCEQ02156 737 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 PUS10Q3MIT2 529 aaKnown RBP17.11■□□□□ 0.33
TGFB1-202ENST00000597453 LRCH2Q5VUJ6 765 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 EFCAB12Q6NXP0 572 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 SLC24A5Q71RS6 500 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 LRRC71Q8N4P6 559 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 SPPL3Q8TCT6 385 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 TEKT3Q9BXF9 490 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 C1orf112Q9NSG2 853 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 HCSTQ9UBK5 93 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 PCDHB7Q9Y5E2 793 aa17.11■□□□□ 0.33
TGFB1-202ENST00000597453 CPLX1O14810 134 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 MAGEB2O15479 319 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 LINC01565O15544 149 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 JAK3P52333 1124 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 DSC3Q14574 896 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 CLUL1Q15846 466 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 Q4G0T1 1027 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 NAALADL2Q58DX5 795 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 ODR4Q5SWX8 454 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 FAM102BQ5T8I3 360 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 BLIDQ8IZY5 108 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 DAGLBQ8NCG7 672 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 POF1BQ8WVV4 589 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 ZNF668Q96K58 619 aaPredicted RBP17.1■□□□□ 0.33
TGFB1-202ENST00000597453 ADAMTS10Q9H324 1103 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 IGFLR1Q9H665 355 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 C11orf16Q9NQ32 467 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 AKT3Q9Y243 479 aa17.1■□□□□ 0.33
TGFB1-202ENST00000597453 TBKBP1A7MCY6 615 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 NCK2O43639 380 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 DTNBO60941 627 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 TBX10O75333 385 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 PSMD10O75832 226 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 FGFR1P11362 822 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 SSTR3P32745 418 aaPredicted RBP17.09■□□□□ 0.33
TGFB1-202ENST00000597453 NLRP11P59045 1033 aaKnown RBP17.09■□□□□ 0.33
TGFB1-202ENST00000597453 B3GNT9Q6UX72 402 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 FAM43BQ6ZT52 329 aaPredicted RBP17.09■□□□□ 0.33
TGFB1-202ENST00000597453 ADGRD2Q7Z7M1 963 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 LRFN3Q9BTN0 628 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 NRBP2Q9NSY0 501 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 PCDHGC5Q9Y5F6 944 aa17.09■□□□□ 0.33
TGFB1-202ENST00000597453 CYP3A7-CYP3A51PA0A087WV96 503 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 TMEM150BA6NC51 233 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 FAM86C2PA6NEL3 165 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 PI4K2BG5E9Z4 385 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 CYP3A7P24462 503 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 SFNP31947 248 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 FAM189BP81408 668 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 SCRN1Q12765 414 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 ANKRD1Q15327 319 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 MIER3Q7Z3K6 550 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 MBOAT7Q96N66 472 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 MAP7D2Q96T17 732 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 C22orf23Q9BZE7 217 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 TMEM161AQ9NX61 479 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 KCNJ14Q9UNX9 436 aa17.08■□□□□ 0.32
TGFB1-202ENST00000597453 STBD1O95210 358 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 TMOD1P28289 359 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 GPC3P51654 580 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 ZP2Q05996 745 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 ADAM15Q13444 863 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 DRP2Q13474 957 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 TARBP2Q15633 366 aaKnown RBP17.07■□□□□ 0.32
TGFB1-202ENST00000597453 TMEM31Q5JXX7 168 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 SPOUT1Q5T280 376 aaKnown RBP17.07■□□□□ 0.32
TGFB1-202ENST00000597453 CPLX2Q6PUV4 134 aaKnown RBP17.07■□□□□ 0.32
TGFB1-202ENST00000597453 ETNPPLQ8TBG4 499 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 SH2D3AQ9BRG2 576 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 ATP6V0A4Q9HBG4 840 aa17.07■□□□□ 0.32
TGFB1-202ENST00000597453 TYW1Q9NV66 732 aaKnown RBP17.07■□□□□ 0.32
TGFB1-202ENST00000597453 SLC37A4O43826 429 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms