RNA–Protein interactions for RNA: ENST00000589538.5

DNMT1-221, Transcript of DNA methyltransferase 1, humanhuman

TSL 5

Gene DNMT1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-221ENST00000589538 DEFB103AP81534 67 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 CYP4A11Q02928 519 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 PAK2Q13177 524 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 CTTNQ14247 550 aaKnown RBP18.37■□□□□ 0.53
DNMT1-221ENST00000589538 Q7L0L9 218 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 BRAPQ7Z569 592 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 LRRC71Q8N4P6 559 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 CEP89Q96ST8 783 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 TUFT1Q9NNX1 390 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 GINS2Q9Y248 185 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 LOXHD1Q8IVV2 1947 aa18.37■□□□□ 0.53
DNMT1-221ENST00000589538 GPR182O15218 404 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 TLL1O43897 1013 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 GPR32O75388 356 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 GJB5O95377 273 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 VTNP04004 478 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 XRCC6P12956 609 aaKnown RBP eCLIP18.36■□□□□ 0.53
DNMT1-221ENST00000589538 MUTP22033 750 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 PRPHP41219 470 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 RABGGTBP53611 331 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 PTGDRQ13258 359 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 KIZQ2M2Z5 673 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 HAUS3Q68CZ6 603 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 MYOCDQ8IZQ8 938 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 CCDC43Q96MW1 224 aaKnown RBP18.36■□□□□ 0.53
DNMT1-221ENST00000589538 RAD9AQ99638 391 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 POLR3CQ9BUI4 534 aaPredicted RBP18.36■□□□□ 0.53
DNMT1-221ENST00000589538 OSBPL7Q9BZF2 842 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 NKX2-4Q9H2Z4 354 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 AGO3Q9H9G7 860 aaKnown RBP18.36■□□□□ 0.53
DNMT1-221ENST00000589538 ANKEF1Q9NU02 776 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 RNF216Q9NWF9 866 aaPredicted RBP18.36■□□□□ 0.53
DNMT1-221ENST00000589538 WRAP73Q9P2S5 460 aaPredicted RBP18.36■□□□□ 0.53
DNMT1-221ENST00000589538 PADI3Q9ULW8 664 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 PCDHB6Q9Y5E3 794 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 SZT2Q5T011 3432 aa18.36■□□□□ 0.53
DNMT1-221ENST00000589538 PTPRSQ13332 1948 aa18.35■□□□□ 0.53
DNMT1-221ENST00000589538 POTEMA6NI47 508 aa18.35■□□□□ 0.53
DNMT1-221ENST00000589538 RPS6KA5O75582 802 aa18.35■□□□□ 0.53
DNMT1-221ENST00000589538 CD52P31358 61 aa18.35■□□□□ 0.53
DNMT1-221ENST00000589538 POLGP54098 1239 aaPredicted RBP18.35■□□□□ 0.53
DNMT1-221ENST00000589538 NLRP11P59045 1033 aaKnown RBP18.35■□□□□ 0.53
DNMT1-221ENST00000589538 PDIA5Q14554 519 aa18.35■□□□□ 0.53
DNMT1-221ENST00000589538 PPP2R2DQ66LE6 453 aa18.35■□□□□ 0.53
DNMT1-221ENST00000589538 PLA2G4FQ68DD2 849 aa18.35■□□□□ 0.53
DNMT1-221ENST00000589538 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.35■□□□□ 0.531e-63■■■■■ 59.7
DNMT1-221ENST00000589538 C4orf32Q8N8J7 132 aa18.35■□□□□ 0.53
DNMT1-221ENST00000589538 TTYH1Q9H313 450 aaPredicted RBP18.35■□□□□ 0.53
DNMT1-221ENST00000589538 DHX33Q9H6R0 707 aaKnown RBP18.35■□□□□ 0.53
DNMT1-221ENST00000589538 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.35■□□□□ 0.53
DNMT1-221ENST00000589538 YBX2Q9Y2T7 364 aaKnown RBP18.35■□□□□ 0.53
DNMT1-221ENST00000589538 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.34■□□□□ 0.53
DNMT1-221ENST00000589538 VPS37CA5D8V6 355 aaPredicted RBP18.34■□□□□ 0.53
DNMT1-221ENST00000589538 TMEM150BA6NC51 233 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 BMP15O95972 392 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 RPA1P27694 616 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 NPEPPSP55786 919 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 NBR1Q14596 966 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 XKR9Q5GH70 373 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 DTHD1Q6ZMT9 781 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 TCP11Q8WWU5 503 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 FAM161BQ96MY7 647 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 SCLT1Q96NL6 688 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 OSMRQ99650 979 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 INSL6Q9Y581 213 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 ARID2Q68CP9 1835 aa18.34■□□□□ 0.53
DNMT1-221ENST00000589538 PDIA4P13667 645 aaKnown RBP18.33■□□□□ 0.52
DNMT1-221ENST00000589538 EIF4BP23588 611 aaKnown RBP18.33■□□□□ 0.52
DNMT1-221ENST00000589538 GPC3P51654 580 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 NFX1Q12986 1120 aaKnown RBP18.33■□□□□ 0.52
DNMT1-221ENST00000589538 ZNF410Q86VK4 478 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 NLRP7Q8WX94 980 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 PSPC1Q8WXF1 523 aaKnown RBP18.33■□□□□ 0.52
DNMT1-221ENST00000589538 NACC1Q96RE7 527 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 SH2D3AQ9BRG2 576 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 GCOM2Q9BZD3 368 aaPredicted RBP18.33■□□□□ 0.52
DNMT1-221ENST00000589538 INO80BQ9C086 356 aaPredicted RBP18.33■□□□□ 0.52
DNMT1-221ENST00000589538 ADAMTS10Q9H324 1103 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 CDHR5Q9HBB8 845 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 ERVK-5Q9HDB9 667 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 SUCLA2Q9P2R7 463 aaPredicted RBP18.33■□□□□ 0.52
DNMT1-221ENST00000589538 LRWD1Q9UFC0 647 aa18.33■□□□□ 0.52
DNMT1-221ENST00000589538 NOC2LQ9Y3T9 749 aaKnown RBP18.33■□□□□ 0.52
DNMT1-221ENST00000589538 ENPP3O14638 875 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 ASAP2O43150 1006 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 DGAT1O75907 488 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 CA3P07451 260 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 HSP90AA1P07900 732 aaKnown RBP18.32■□□□□ 0.52
DNMT1-221ENST00000589538 MYOGP15173 224 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 ATP2C1P98194 919 aaPredicted RBP18.32■□□□□ 0.52
DNMT1-221ENST00000589538 ARL6IP4Q66PJ3 421 aaKnown RBP18.32■□□□□ 0.52
DNMT1-221ENST00000589538 CATSPER3Q86XQ3 398 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 IGSF22Q8N9C0 903 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 PPP1R16BQ96T49 567 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 MTRQ99707 1265 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 TSPYL2Q9H2G4 693 aaPredicted RBP18.32■□□□□ 0.52
DNMT1-221ENST00000589538 C1orf112Q9NSG2 853 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 STXBP5LQ9Y2K9 1186 aa18.32■□□□□ 0.52
DNMT1-221ENST00000589538 STAG3L1P0CL83 205 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms