RNA–Protein interactions for RNA: ENST00000588737.5

RPRD1A-207, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 2 BASIC

Gene RPRD1A, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-207ENST00000588737 ETNPPLQ8TBG4 499 aa25.29■■□□□ 1.64
RPRD1A-207ENST00000588737 ADAM2Q99965 735 aa25.29■■□□□ 1.64
RPRD1A-207ENST00000588737 PCDHB7Q9Y5E2 793 aa25.29■■□□□ 1.64
RPRD1A-207ENST00000588737 REV3LO60673 3130 aa25.28■■□□□ 1.64
RPRD1A-207ENST00000588737 GPR32O75388 356 aa25.28■■□□□ 1.64
RPRD1A-207ENST00000588737 NLRP11P59045 1033 aaKnown RBP25.28■■□□□ 1.64
RPRD1A-207ENST00000588737 CRIPAKQ8N1N5 446 aa25.28■■□□□ 1.64
RPRD1A-207ENST00000588737 OXER1Q8TDS5 423 aa25.28■■□□□ 1.64
RPRD1A-207ENST00000588737 C11orf84Q9BUA3 381 aaPredicted RBP25.28■■□□□ 1.64
RPRD1A-207ENST00000588737 RNF216Q9NWF9 866 aaPredicted RBP25.28■■□□□ 1.64
RPRD1A-207ENST00000588737 COL4A6Q14031 1691 aa25.28■■□□□ 1.64
RPRD1A-207ENST00000588737 SLC37A4O43826 429 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 MARCH6O60337 910 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 SEC24BO95487 1268 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 SARSP49591 514 aaKnown RBP25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 TBC1D8BQ0IIM8 1120 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 TIGD5Q53EQ6 642 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 XKR3Q5GH77 459 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 B3GNT9Q6UX72 402 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 CMTR2Q8IYT2 770 aaKnown RBP25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 ZNF710Q8N1W2 664 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 BANK1Q8NDB2 785 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 CLP1Q92989 425 aaKnown RBP25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 GTF3C6Q969F1 213 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 NAP1L4Q99733 375 aaKnown RBP25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 BRMS1Q9HCU9 246 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 RGS18Q9NS28 235 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 C1orf112Q9NSG2 853 aa25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 SEPT9Q9UHD8 586 aaPredicted RBP25.27■■□□□ 1.64
RPRD1A-207ENST00000588737 DDX11L8A8MPP1 907 aa25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 C5orf67F2Z3F1 127 aa25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 CCNT1O60563 726 aaKnown RBP25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 FDPSP14324 419 aaKnown RBP25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 GCFC2P16383 781 aaKnown RBP25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 PAN2Q504Q3 1202 aaKnown RBP25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 PPP4R3AQ6IN85 833 aa25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 SLC24A5Q71RS6 500 aa25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 FAM228AQ86W67 206 aa25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 FAM20AQ96MK3 541 aa25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 NIFKQ9BYG3 293 aaKnown RBP25.26■■□□□ 1.63
RPRD1A-207ENST00000588737 SPTBN5Q9NRC6 3674 aaKnown RBP25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 MGEA5O60502 916 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 LARGE1O95461 756 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 LINC00271P0C7V0 271 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 KRT2P35908 639 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 MTERF2Q49AM1 385 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 LINC01465Q8N7H1 131 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 PLVAPQ9BX97 442 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 LMAN2LQ9H0V9 348 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 ADAMTS10Q9H324 1103 aa25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 MRPL42Q9Y6G3 142 aaKnown RBP25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 TCF20Q9UGU0 1960 aaKnown RBP25.25■■□□□ 1.63
RPRD1A-207ENST00000588737 NLRC5Q86WI3 1866 aa25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 GATMP50440 423 aa25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 PSMC5P62195 406 aa25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 TARBP2Q15633 366 aaKnown RBP25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 ZNF668Q96K58 619 aaPredicted RBP25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 SCLT1Q96NL6 688 aa25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 NECAB3Q96P71 396 aaPredicted RBP25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 UBE2ZQ9H832 354 aaPredicted RBP25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 KCNMB3Q9NPA1 279 aa25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 WDR81Q562E7 1941 aa25.24■■□□□ 1.63
RPRD1A-207ENST00000588737 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25.23■■□□□ 1.63
RPRD1A-207ENST00000588737 GRM6O15303 877 aa25.23■■□□□ 1.63
RPRD1A-207ENST00000588737 ZSCAN20P17040 1043 aaPredicted RBP25.23■■□□□ 1.63
RPRD1A-207ENST00000588737 EIF4BP23588 611 aaKnown RBP25.23■■□□□ 1.63
RPRD1A-207ENST00000588737 DNM2P50570 870 aa25.23■■□□□ 1.63
RPRD1A-207ENST00000588737 NSUN3Q9H649 340 aaKnown RBP25.23■■□□□ 1.63
RPRD1A-207ENST00000588737 RALGAPA2Q2PPJ7 1873 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 TMEM150BA6NC51 233 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 C9IYK1 514 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 EML1O00423 815 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 TBX3O15119 743 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 DKC1O60832 514 aaKnown RBP eCLIP25.22■■□□□ 1.634e-7■■■■■ 32.2
RPRD1A-207ENST00000588737 STBD1O95210 358 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 BAG4O95429 457 aaKnown RBP25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 CDC42EP1Q00587 391 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 NR5A1Q13285 461 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 PPP2R5CQ13362 524 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 TRIM29Q14134 588 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 TCEAL5Q5H9L2 206 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 NSUN7Q8NE18 718 aaKnown RBP25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 SH2D3AQ9BRG2 576 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 ATP6V0A4Q9HBG4 840 aa25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 ALG13Q9NP73 1137 aaKnown RBP25.22■■□□□ 1.63
RPRD1A-207ENST00000588737 KCNA5P22460 613 aa25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 QARSP47897 775 aaKnown RBP25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 GPC3P51654 580 aa25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 FAM189BP81408 668 aa25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 EARS2Q5JPH6 523 aaKnown RBP25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 EP400NLQ6ZTU2 488 aa25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 NLRP7Q8WX94 980 aa25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 VAV3Q9UKW4 847 aa25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 PLAGL2Q9UPG8 496 aa25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 NCOR1O75376 2440 aa25.21■■□□□ 1.63
RPRD1A-207ENST00000588737 TBKBP1A7MCY6 615 aa25.2■■□□□ 1.62
RPRD1A-207ENST00000588737 JAK2O60674 1132 aa25.2■■□□□ 1.62
RPRD1A-207ENST00000588737 P4HBP07237 508 aaKnown RBP25.2■■□□□ 1.62
RPRD1A-207ENST00000588737 FOSBP53539 338 aa25.2■■□□□ 1.62
RPRD1A-207ENST00000588737 DSC3Q14574 896 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms