RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 HIPK3Q9H422 1215 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 FNDC3AQ9Y2H6 1198 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 KIAA1217Q5T5P2 1943 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 CDC45O75419 566 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 CSF2RAP15509 400 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 CASTP20810 708 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 CBLBQ13191 982 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 PDE12Q6L8Q7 609 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 TMEM214Q6NUQ4 689 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 PSRC1Q6PGN9 363 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 Q7L0L9 218 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 C16orf59Q7L2K0 433 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 RPUSD2Q8IZ73 545 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 RRP36Q96EU6 259 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 CCDC136Q96JN2 1154 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 NEK1Q96PY6 1258 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 SPON2Q9BUD6 331 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 NOC4LQ9BVI4 516 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 IL23AQ9NPF7 189 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 STXBP5LQ9Y2K9 1186 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 SLC12A7Q9Y666 1083 aa11.3□□□□□ -0.6
HNRNPC-228ENST00000557033 TMEM265A0A087WTH1 108 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 STAM2O75886 525 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 SSBP05455 408 aaKnown RBP eCLIP11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 MYCLP12524 364 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 HOXA13P31271 388 aaPredicted RBP11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 CYP2C18P33260 490 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 ARHGAP1Q07960 439 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 KRT32Q14532 448 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 PGM5Q15124 567 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 DGKDQ16760 1214 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 TMEM240Q5SV17 173 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 ZNF697Q5TEC3 545 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 SYNE3Q6ZMZ3 975 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 Q6ZVU0 165 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 DHX32Q7L7V1 743 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 ZNF438Q7Z4V0 828 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 SGMS1Q86VZ5 419 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 DHX37Q8IY37 1157 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 FANCBQ8NB91 859 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 AFG1LQ8WV93 481 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 BRINP2Q9C0B6 783 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 NPHS2Q9NP85 383 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 SEC63Q9UGP8 760 aaKnown RBP11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 MRVI1Q9Y6F6 885 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 LAMA3Q16787 3333 aa11.29□□□□□ -0.6
HNRNPC-228ENST00000557033 hCG_2014768A0A024R1R8 64 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 PPFIA4O75335 1185 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 FGBP02675 491 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 MMP3P08254 477 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 CCND2P30279 289 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 GGCXP38435 758 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 IDH3AP50213 366 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 EXOSC10Q01780 885 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 RASIP1Q5U651 963 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 IER5Q5VY09 327 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 XRRA1Q6P2D8 792 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 ZNF365Q70YC5 407 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 SESTD1Q86VW0 696 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 FCHSD1Q86WN1 690 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 SKAP1Q86WV1 359 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 SRBD1Q8N5C6 995 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 CUL5Q93034 780 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 SUSD3Q96L08 255 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 MYL10Q9BUA6 226 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 MTIF3Q9H2K0 278 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 SEMA6BQ9H3T3 888 aa11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 TRMT13Q9NUP7 481 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-228ENST00000557033 SCN10AQ9Y5Y9 1956 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 PHACTR2O75167 634 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 RGS20O76081 388 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 PFKMP08237 780 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 CCL23P55773 120 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 NFX1Q12986 1120 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 GNPTABQ3T906 1256 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 FAM47CQ5HY64 1035 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 CELF3Q5SZQ8 465 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 GALNT12Q8IXK2 581 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 SMARCC2Q8TAQ2 1214 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 MICAL1Q8TDZ2 1067 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 HERVK_113Q902F9 699 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 KATNAL1Q9BW62 490 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 SIRPGQ9P1W8 387 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 ADAMTS1Q9UHI8 967 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 USP20Q9Y2K6 914 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 FRMPD4Q14CM0 1322 aa11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 BAZ2BQ9UIF8 2168 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-228ENST00000557033 ENPP3O14638 875 aa11.26□□□□□ -0.61
HNRNPC-228ENST00000557033 MEIS2O14770 477 aa11.26□□□□□ -0.61
HNRNPC-228ENST00000557033 PLEKHA8P1O95397 391 aa11.26□□□□□ -0.61
HNRNPC-228ENST00000557033 ACRP10323 421 aa11.26□□□□□ -0.61
HNRNPC-228ENST00000557033 CYP2C9P11712 490 aa11.26□□□□□ -0.61
HNRNPC-228ENST00000557033 IBSPP21815 317 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-228ENST00000557033 ICAM3P32942 547 aa11.26□□□□□ -0.61
HNRNPC-228ENST00000557033 RFC2P35250 354 aa11.26□□□□□ -0.61
HNRNPC-228ENST00000557033 BFSP2Q13515 415 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms