RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	TAF2	Q6P1X5	1199 aa		13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	ENGASE	Q8NFI3	743 aa		13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	DIS3L	Q8TF46	1054 aa	Known RBP	13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	TCP11	Q8WWU5	503 aa		13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	SYAP1	Q96A49	352 aa	Predicted RBP	13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	DRC1	Q96MC2	740 aa		13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	MAP7D2	Q96T17	732 aa		13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	SUGCT	Q9HAC7	445 aa		13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	KBTBD4	Q9NVX7	518 aa		13.9	□□□□□ -0.18
ABCD4-223	ENST00000555904	C22orf31	O95567	290 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	COL6A1	P12109	1028 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	CYP11B2	P19099	503 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	EN2	P19622	333 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	GUCY2C	P25092	1073 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	ATN1	P54259	1190 aa	Predicted RBP	13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	RAD51AP2	Q09MP3	1159 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	FAM102B	Q5T8I3	360 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	RINT1	Q6NUQ1	792 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	MTHFD1L	Q6UB35	978 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	SLC39A5	Q6ZMH5	540 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	RSPH3	Q86UC2	560 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	PPP1R13L	Q8WUF5	828 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	KIFAP3	Q92845	792 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	CCDC47	Q96A33	483 aa	Known RBP	13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	PAGE5	Q96GU1	130 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	RUSC1	Q9BVN2	902 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	DHX33	Q9H6R0	707 aa	Known RBP	13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	ODF2L	Q9ULJ1	636 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	GRIN2D	O15399	1336 aa		13.89	□□□□□ -0.19
ABCD4-223	ENST00000555904	MBLAC1	A4D2B0	266 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	DCDC2C	A8MYV0	355 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	PQBP1	O60828	265 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	FAM13A	O94988	1023 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	SMC2	O95347	1197 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	CYP2C9	P11712	490 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	HOXC8	P31273	242 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	MNX1	P50219	401 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	ASIC1	P78348	528 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	POSTN	Q15063	836 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	NFKBIB	Q15653	356 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	C1orf53	Q5VUE5	145 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	GDF6	Q6KF10	455 aa	Predicted RBP	13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	EFCAB12	Q6NXP0	572 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	C1orf186	Q6ZWK4	172 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	MAEA	Q7L5Y9	396 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	DYM	Q7RTS9	669 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	CCDC155	Q8N6L0	562 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	SLC43A3	Q8NBI5	491 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	GPT2	Q8TD30	523 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	LRRC15	Q8TF66	581 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	PSPC1	Q8WXF1	523 aa	Known RBP	13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	DDX12P	Q92771	950 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	STAM	Q92783	540 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	TRIM9	Q9C026	710 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	NUP62CL	Q9H1M0	184 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	ZHX3	Q9H4I2	956 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	AKT3	Q9Y243	479 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	PCDHA2	Q9Y5H9	948 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	LOXHD1	Q8IVV2	1947 aa		13.88	□□□□□ -0.19
ABCD4-223	ENST00000555904	SMIM35	A0A1B0GVV1	85 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904		M0QZ92	97 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	TREH	O43280	583 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	GTPBP6	O43824	516 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	HIP1R	O75146	1068 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	IDE	P14735	1019 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	SOX10	P56693	466 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	CDC42EP1	Q00587	391 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	MXD4	Q14582	209 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	PPP2R5A	Q15172	486 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	MARCH8	Q5T0T0	291 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	IER5	Q5VY09	327 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	CCDC65	Q8IXS2	484 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	ELOA2	Q8IYF1	753 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	GRAMD1C	Q8IYS0	662 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	LRRC71	Q8N4P6	559 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	IFT74	Q96LB3	600 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	SCLT1	Q96NL6	688 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	REEP2	Q9BRK0	252 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	FAM49A	Q9H0Q0	323 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	TRMT13	Q9NUP7	481 aa	Known RBP	13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	LARS	Q9P2J5	1176 aa	Known RBP	13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	KCNG1	Q9UIX4	513 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	ATP11B	Q9Y2G3	1177 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	COL4A3BP	Q9Y5P4	624 aa		13.87	□□□□□ -0.19
ABCD4-223	ENST00000555904	MYH9	P35579	1960 aa	Known RBP	13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	SCN10A	Q9Y5Y9	1956 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	MYMK	A6NI61	221 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	B4GALT4	O60513	344 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	CDK7	P50613	346 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	CLCN3	P51790	818 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	ADAM17	P78536	824 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	ZNF200	P98182	395 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	PTK7	Q13308	1070 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	DMP1	Q13316	513 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	TFDP1	Q14186	410 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	SNX17	Q15036	470 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	CAMK4	Q16566	473 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	KLHL40	Q2TBA0	621 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	TRIM60	Q495X7	471 aa		13.86	□□□□□ -0.19

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