RNA–Protein interactions for RNA: ENST00000554873.5

SYNE3-203, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 5 BASIC

Gene SYNE3, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-203ENST00000554873 INTS9Q9NV88 658 aaKnown RBP16.97■□□□□ 0.31
SYNE3-203ENST00000554873 NKX1-2Q9UD57 310 aaPredicted RBP16.97■□□□□ 0.31
SYNE3-203ENST00000554873 RREB1Q92766 1687 aa16.96■□□□□ 0.31
SYNE3-203ENST00000554873 EPHB6O15197 1021 aa16.96■□□□□ 0.31
SYNE3-203ENST00000554873 GSTA2P09210 222 aa16.96■□□□□ 0.31
SYNE3-203ENST00000554873 RAD23BP54727 409 aa16.96■□□□□ 0.31
SYNE3-203ENST00000554873 RNASE9P60153 205 aaKnown RBP16.96■□□□□ 0.31
SYNE3-203ENST00000554873 SFSWAPQ12872 951 aaKnown RBP16.96■□□□□ 0.31
SYNE3-203ENST00000554873 PABPC1LQ4VXU2 614 aaKnown RBP16.96■□□□□ 0.31
SYNE3-203ENST00000554873 OPTNQ96CV9 577 aa16.96■□□□□ 0.31
SYNE3-203ENST00000554873 AK8Q96MA6 479 aa16.96■□□□□ 0.31
SYNE3-203ENST00000554873 SCN7AQ01118 1682 aa16.96■□□□□ 0.31
SYNE3-203ENST00000554873 PALMO75781 387 aa16.96■□□□□ 0.3
SYNE3-203ENST00000554873 OR52Z1P0C646 297 aa16.96■□□□□ 0.3
SYNE3-203ENST00000554873 LETM2Q2VYF4 491 aa16.96■□□□□ 0.3
SYNE3-203ENST00000554873 DPY19L2Q6NUT2 758 aa16.96■□□□□ 0.3
SYNE3-203ENST00000554873 IRGCQ6NXR0 463 aa16.96■□□□□ 0.3
SYNE3-203ENST00000554873 KIAA0895Q8NCT3 520 aa16.96■□□□□ 0.3
SYNE3-203ENST00000554873 GGT7Q9UJ14 662 aa16.96■□□□□ 0.3
SYNE3-203ENST00000554873 ZMYND8Q9ULU4 1186 aaPredicted RBP16.96■□□□□ 0.3
SYNE3-203ENST00000554873 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.96■□□□□ 0.3
SYNE3-203ENST00000554873 MYH7BA7E2Y1 1941 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 CCNT1O60563 726 aaKnown RBP16.95■□□□□ 0.3
SYNE3-203ENST00000554873 SHBGP04278 402 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 GOLGA8HP0CJ92 632 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 SPDYCQ5MJ68 293 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 MEI1Q5TIA1 1274 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 PRMT1Q99873 361 aaKnown RBP16.95■□□□□ 0.3
SYNE3-203ENST00000554873 ADAM7Q9H2U9 754 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 CPVLQ9H3G5 476 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 MKNK2Q9HBH9 465 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 ATXN10Q9UBB4 475 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 KIAA1551Q9HCM1 1747 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 LAMB1P07942 1786 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 SUN1O94901 812 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 FTCDO95954 541 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 PENKP01210 267 aaPredicted RBP16.95■□□□□ 0.3
SYNE3-203ENST00000554873 TECP42680 631 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 RPS8P62241 208 aaKnown RBP16.95■□□□□ 0.3
SYNE3-203ENST00000554873 CLEC4GQ6UXB4 293 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 BICDL1Q6ZP65 573 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 TXNRD3Q86VQ6 643 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 SYCP3Q8IZU3 236 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
SYNE3-203ENST00000554873 PALM3A6NDB9 673 aaPredicted RBP16.94■□□□□ 0.3
SYNE3-203ENST00000554873 SKIV2L2P42285 1042 aaKnown RBP16.94■□□□□ 0.3
SYNE3-203ENST00000554873 DHX9Q08211 1270 aaKnown RBP16.94■□□□□ 0.3
SYNE3-203ENST00000554873 STK32AQ8WU08 396 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 TRIM7Q9C029 511 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 MTFR1LQ9H019 292 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 LRRC4CQ9HCJ2 640 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 FAM207AQ9NSI2 230 aaPredicted RBP16.94■□□□□ 0.3
SYNE3-203ENST00000554873 SCOCQ9UIL1 159 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 SIK3Q9Y2K2 1263 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 CES2O00748 559 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 VWA3BQ502W6 1294 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 CENPPQ6IPU0 288 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 LCA5Q86VQ0 697 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 GPIHBP1Q8IV16 184 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.94■□□□□ 0.3
SYNE3-203ENST00000554873 SCFD2Q8WU76 684 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 DNAJC9Q8WXX5 260 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 PGM2Q96G03 612 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 TMEM47Q9BQJ4 181 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 ZMYND12Q9H0C1 365 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 CD2APQ9Y5K6 639 aa16.94■□□□□ 0.3
SYNE3-203ENST00000554873 O00370 1275 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 TSPY3P0CV98 308 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 TSPY8P0CW00 308 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 TPBGLP0DKB5 382 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 SLC1A4P43007 532 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 CNNM4Q6P4Q7 775 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 TRIM42Q8IWZ5 723 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 SLC44A5Q8NCS7 719 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 NDNQ99608 321 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 CYP39A1Q9NYL5 469 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 STX8Q9UNK0 236 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 ZNF335Q9H4Z2 1342 aaPredicted RBP16.93■□□□□ 0.3
SYNE3-203ENST00000554873 CCNB1P14635 433 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 PPP1R2P41236 205 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 AMPD3Q01432 767 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 DIXDC1Q155Q3 683 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 DZIP1Q86YF9 867 aaKnown RBP16.93■□□□□ 0.3
SYNE3-203ENST00000554873 FAM163AQ96GL9 167 aaPredicted RBP16.93■□□□□ 0.3
SYNE3-203ENST00000554873 RXFP1Q9HBX9 757 aa16.93■□□□□ 0.3
SYNE3-203ENST00000554873 KLRF2D3W0D1 207 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 PEX11AO75192 247 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 NAPAP54920 295 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 GFPT1Q06210 699 aaPredicted RBP16.92■□□□□ 0.3
SYNE3-203ENST00000554873 EHHADHQ08426 723 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 NONOQ15233 471 aaKnown RBP eCLIP16.92■□□□□ 0.3
SYNE3-203ENST00000554873 ASTE1Q2TB18 679 aaPredicted RBP16.92■□□□□ 0.3
SYNE3-203ENST00000554873 ASAP3Q8TDY4 903 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 SH3RF3Q8TEJ3 882 aaPredicted RBP16.92■□□□□ 0.3
SYNE3-203ENST00000554873 TAF4BQ92750 862 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 FAM136AQ96C01 138 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 MMRN2Q9H8L6 949 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 PNMA3Q9UL41 463 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 TMCO1Q9UM00 188 aa16.92■□□□□ 0.3
SYNE3-203ENST00000554873 TRIM33Q9UPN9 1127 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms