RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 SAMM50Q9Y512 469 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 MRPL42Q9Y6G3 142 aaKnown RBP7.47□□□□□ -1.21
SLIRP-203ENST00000554074 C5orf42Q9H799 3197 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 C9IYK1 514 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 PI4K2BG5E9Z4 385 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 GRM6O15303 877 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 ZNF862O60290 1169 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 MGEA5O60502 916 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 GAS7O60861 476 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 GPR32O75388 356 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 PSMD10O75832 226 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 CDKL5O76039 1030 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 OATP04181 439 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 FAM189BP81408 668 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 CDC42EP1Q00587 391 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 UBE3AQ05086 875 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 NFX1Q12986 1120 aaKnown RBP7.46□□□□□ -1.22
SLIRP-203ENST00000554074 CAMK1Q14012 370 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 DSC3Q14574 896 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 NPY5RQ15761 445 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 CSPP1Q1MSJ5 1256 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 TMEM266Q2M3C6 531 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 LRCH2Q5VUJ6 765 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 B3GNT9Q6UX72 402 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 FAM228AQ86W67 206 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 BLIDQ8IZY5 108 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 SPPL3Q8TCT6 385 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 TBCKQ8TEA7 893 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 TMEM40Q8WWA1 233 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 PPP2R3CQ969Q6 453 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 MAP7D2Q96T17 732 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 OSMRQ99650 979 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 ADAM2Q99965 735 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 TEKT3Q9BXF9 490 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 NIFKQ9BYG3 293 aaKnown RBP7.46□□□□□ -1.22
SLIRP-203ENST00000554074 CDHR5Q9HBB8 845 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 AAASQ9NRG9 546 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 NRBP2Q9NSY0 501 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 TMEM161AQ9NX61 479 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 LRFN2Q9ULH4 789 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 ST3GAL5Q9UNP4 418 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 ARIH1Q9Y4X5 557 aaPredicted RBP7.46□□□□□ -1.22
SLIRP-203ENST00000554074 PCDHB7Q9Y5E2 793 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 TDRD15B5MCY1 1934 aaKnown RBP7.46□□□□□ -1.22
SLIRP-203ENST00000554074 STK36Q9NRP7 1315 aa7.46□□□□□ -1.22
SLIRP-203ENST00000554074 ZNF318Q5VUA4 2279 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 MYO10Q9HD67 2058 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 FSD2A1L4K1 749 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 DENND3A2RUS2 1198 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 HOXA2O43364 376 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 GPR37L1O60883 481 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 VTNP04004 478 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 ITGB1P05556 798 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 IL9P15248 144 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 EIF4BP23588 611 aaKnown RBP7.45□□□□□ -1.22
SLIRP-203ENST00000554074 LTBRP36941 435 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 ANAPC15P60006 121 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 PRKCEQ02156 737 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 HYAL1Q12794 435 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 NONOQ15233 471 aaKnown RBP eCLIP7.45□□□□□ -1.22
SLIRP-203ENST00000554074 TARBP2Q15633 366 aaKnown RBP7.45□□□□□ -1.22
SLIRP-203ENST00000554074 KIZQ2M2Z5 673 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 PDE12Q6L8Q7 609 aaKnown RBP7.45□□□□□ -1.22
SLIRP-203ENST00000554074 EFCAB12Q6NXP0 572 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 GJD3Q8N144 294 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 METTL13Q8N6R0 699 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 KLHL23Q8NBE8 558 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 ETNPPLQ8TBG4 499 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 RSPH1Q8WYR4 309 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 UPF3BQ9BZI7 483 aaKnown RBP7.45□□□□□ -1.22
SLIRP-203ENST00000554074 ADAMTS10Q9H324 1103 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 UNC45AQ9H3U1 944 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 EPHX3Q9H6B9 360 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 ALG13Q9NP73 1137 aaKnown RBP7.45□□□□□ -1.22
SLIRP-203ENST00000554074 PDRG1Q9NUG6 133 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 CLDND1Q9NY35 253 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 GINS2Q9Y248 185 aa7.45□□□□□ -1.22
SLIRP-203ENST00000554074 TRIOO75962 3097 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 IGKV6-21A0A0C4DH24 114 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 C19orf67A6NJJ6 358 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 H3BQ06 376 aaPredicted RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 TBX3O15119 743 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 PPFIA3O75145 1194 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 TDP2O95551 362 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 ALADP13716 330 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 DARSP14868 501 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 GCFC2P16383 781 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 XBP1P17861 261 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 LAG3P18627 525 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 GPC3P51654 580 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 CLCN3P51790 818 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 NLRP11P59045 1033 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 TBC1D8BQ0IIM8 1120 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 SCRN1Q12765 414 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 PPP2R5CQ13362 524 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 ADAM15Q13444 863 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 SMAD4Q13485 552 aaKnown RBP7.44□□□□□ -1.22
SLIRP-203ENST00000554074 ANKRD1Q15327 319 aa7.44□□□□□ -1.22
SLIRP-203ENST00000554074 SMAD2Q15796 467 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms