RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 AMPD3Q01432 767 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 SP3Q02447 781 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 EHHADHQ08426 723 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 ACVR2BQ13705 512 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 KCNB1Q14721 858 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 PLA2G4FQ68DD2 849 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 RINT1Q6NUQ1 792 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 SWSAP1Q6NVH7 229 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 MIS18BP1Q6P0N0 1132 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 C1orf186Q6ZWK4 172 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 UNC13DQ70J99 1090 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 GIMAP8Q8ND71 665 aaPredicted RBP9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 FAM200AQ8TCP9 573 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 CD99L2Q8TCZ2 262 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 EVPLQ92817 2033 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 NACC1Q96RE7 527 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 MED15Q96RN5 788 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 GPR20Q99678 358 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 ABHD16BQ9H3Z7 469 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 GRPEL1Q9HAV7 217 aa9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 ZHX1Q9UKY1 873 aaPredicted RBP9.01□□□□□ -0.97
DEPDC4-207ENST00000549249 FRMD3A2A2Y4 597 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 BACH1O14867 736 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 LGR5O75473 907 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 XRCC5P13010 732 aaKnown RBP9□□□□□ -0.97
DEPDC4-207ENST00000549249 SMPD1P17405 629 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 FECHP22830 423 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 YWHABP31946 246 aaKnown RBP9□□□□□ -0.97
DEPDC4-207ENST00000549249 TCF7P36402 384 aaPredicted RBP9□□□□□ -0.97
DEPDC4-207ENST00000549249 FLT3LGP49771 235 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 RARRES1P49788 294 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 ZNF165P49910 485 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 NPEPPSP55786 919 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 PRKCEQ02156 737 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 PRKCZQ05513 592 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 RAD51AP2Q09MP3 1159 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 COASYQ13057 564 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 MAPK7Q13164 816 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 IRF5Q13568 498 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 GIT2Q14161 759 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 CCDC144BQ3MJ40 725 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 ANO5Q75V66 913 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 LUZP1Q86V48 1076 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 DHX40Q8IX18 779 aaKnown RBP9□□□□□ -0.97
DEPDC4-207ENST00000549249 DHX37Q8IY37 1157 aaKnown RBP9□□□□□ -0.97
DEPDC4-207ENST00000549249 KIAA0895Q8NCT3 520 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 TRPV1Q8NER1 839 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 TRIB2Q92519 343 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 HPS3Q969F9 1004 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 LENG1Q96BZ8 264 aaPredicted RBP9□□□□□ -0.97
DEPDC4-207ENST00000549249 SPATA33Q96N06 139 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 SH2D3AQ9BRG2 576 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 REEP2Q9BRK0 252 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 FGFBP2Q9BYJ0 223 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 MLXIPQ9HAP2 919 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 ZNF302Q9NR11 478 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 EXOC1Q9NV70 894 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 DBR1Q9UK59 544 aaKnown RBP9□□□□□ -0.97
DEPDC4-207ENST00000549249 PCDHA2Q9Y5H9 948 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 MAFBQ9Y5Q3 323 aaPredicted RBP9□□□□□ -0.97
DEPDC4-207ENST00000549249 FRMPD3Q5JV73 1810 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 KAT6AQ92794 2004 aa9□□□□□ -0.97
DEPDC4-207ENST00000549249 SIP14410 1827 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 PVALEFA0A1B0GWK0 134 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 ARHGEF35A5YM69 484 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 GPR25O00155 361 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 FKTNO75072 461 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 GH1P01241 217 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 XRCC6P12956 609 aaKnown RBP eCLIP8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 IDEP14735 1019 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 PRCPP42785 496 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 TRIM32Q13049 653 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 NCAPHQ15003 741 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 DUSP28Q4G0W2 176 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 SWT1Q5T5J6 900 aaKnown RBP8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 UTP14CQ5TAP6 766 aaKnown RBP8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 ZNF658Q5TYW1 1059 aaPredicted RBP8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 IQSEC1Q6DN90 963 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 TRIM50Q86XT4 487 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 DAW1Q8N136 415 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 AOPEPQ8N6M6 819 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 GLIS3Q8NEA6 775 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 AFAP1L1Q8TED9 768 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 ZNF296Q8WUU4 475 aaPredicted RBP8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 SEPT1Q8WYJ6 367 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 ATP6V0A1Q93050 837 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 EMID1Q96A84 441 aaPredicted RBP8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 CEP89Q96ST8 783 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 BPIFA3Q9BQP9 254 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 LRRC27Q9C0I9 530 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 POLD4Q9HCU8 107 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 ANKEF1Q9NU02 776 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 PANK4Q9NVE7 773 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 RMND1Q9NWS8 449 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 GNEQ9Y223 722 aaKnown RBP8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 EMSYQ7Z589 1322 aa8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 TRIP12Q14669 1992 aaPredicted RBP8.99□□□□□ -0.97
DEPDC4-207ENST00000549249 NKRFO15226 690 aaKnown RBP eCLIP8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 AP5Z1O43299 807 aa8.98□□□□□ -0.97
DEPDC4-207ENST00000549249 USO1O60763 962 aaKnown RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 120.9 ms