RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 MYOCDQ8IZQ8 938 aa16.41■□□□□ 0.22
CHFR-223ENST00000544268 RETREG2Q8NC44 543 aa16.41■□□□□ 0.22
CHFR-223ENST00000544268 ATG4CQ96DT6 458 aa16.41■□□□□ 0.22
CHFR-223ENST00000544268 FAM212AQ96EL1 285 aa16.41■□□□□ 0.22
CHFR-223ENST00000544268 JPH2Q9BR39 696 aaPredicted RBP16.41■□□□□ 0.22
CHFR-223ENST00000544268 CSADQ9Y600 493 aa16.41■□□□□ 0.22
CHFR-223ENST00000544268 PARP14Q460N5 1801 aa16.41■□□□□ 0.22
CHFR-223ENST00000544268 TLR2O60603 784 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 NOL4O94818 638 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 PLA2G4BP0C869 781 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 COBLL1Q53SF7 1204 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 GPBP1Q86WP2 473 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 PURBQ96QR8 312 aaKnown RBP16.4■□□□□ 0.22
CHFR-223ENST00000544268 RAB34Q9BZG1 259 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 PCDHA2Q9Y5H9 948 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 ATXN2Q99700 1313 aaKnown RBP16.4■□□□□ 0.22
CHFR-223ENST00000544268 CYP3A7-CYP3A51PA0A087WV96 503 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 A0A1W2PQJ5 194 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 VWA5AO00534 786 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 PPP1R12AO14974 1030 aaPredicted RBP16.4■□□□□ 0.22
CHFR-223ENST00000544268 CYP3A7P24462 503 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 MATR3P43243 847 aaKnown RBP eCLIP16.4■□□□□ 0.22
CHFR-223ENST00000544268 IREB2P48200 963 aaKnown RBP16.4■□□□□ 0.22
CHFR-223ENST00000544268 CYP4A11Q02928 519 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 KIF5AQ12840 1032 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 PPFIA1Q13136 1202 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 NEDD9Q14511 834 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 HERC4Q5GLZ8 1057 aaPredicted RBP16.4■□□□□ 0.22
CHFR-223ENST00000544268 CCDC170Q8IYT3 715 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 CAGE1Q8TC20 777 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 SCFD1Q8WVM8 642 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 RIN2Q8WYP3 895 aaPredicted RBP16.4■□□□□ 0.22
CHFR-223ENST00000544268 CLMNQ96JQ2 1002 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 RLFQ13129 1914 aa16.4■□□□□ 0.22
CHFR-223ENST00000544268 FAM86B1E9PN63 330 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 NFIBO00712 420 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 AKR1B10O60218 316 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 IPO7O95373 1038 aaKnown RBP16.39■□□□□ 0.21
CHFR-223ENST00000544268 FAM86B2P0C5J1 330 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 POTEJP0CG39 1038 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 ALAS1P13196 640 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 CYP11B2P19099 503 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 PABPC4Q13310 644 aaKnown RBP eCLIP16.39■□□□□ 0.21
CHFR-223ENST00000544268 BCAS4Q8TDM0 211 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 CLEC4DQ8WXI8 215 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 MBOAT7Q96N66 472 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 NAP1L4Q99733 375 aaKnown RBP16.39■□□□□ 0.21
CHFR-223ENST00000544268 HOMER2Q9NSB8 354 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 TMOD4Q9NZQ9 345 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 RSPH10B2B2RC85 870 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 RSPH10BP0C881 870 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 NF2P35240 595 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 SPA17Q15506 151 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 CCDC40Q4G0X9 1142 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 HGSNATQ68CP4 663 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 CALR3Q96L12 384 aaKnown RBP16.39■□□□□ 0.21
CHFR-223ENST00000544268 ELP3Q9H9T3 547 aa16.39■□□□□ 0.21
CHFR-223ENST00000544268 WDR90Q96KV7 1748 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 ZBED4O75132 1171 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 ACTN1P12814 892 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 GGCXP38435 758 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 FNTAP49354 379 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 POLR2FP61218 127 aaKnown RBP16.38■□□□□ 0.21
CHFR-223ENST00000544268 LRRC63Q05C16 580 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 TTLL12Q14166 644 aaPredicted RBP16.38■□□□□ 0.21
CHFR-223ENST00000544268 FIGNQ5HY92 759 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 MOXD1Q6UVY6 613 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 CATSPER3Q86XQ3 398 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 KCNMB3Q9NPA1 279 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 CTDP1Q9Y5B0 961 aaPredicted RBP16.38■□□□□ 0.21
CHFR-223ENST00000544268 COL4A3BPQ9Y5P4 624 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 CAPN7Q9Y6W3 813 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 EIF3HO15372 352 aaKnown RBP eCLIP16.38■□□□□ 0.21
CHFR-223ENST00000544268 SLC7A5Q01650 507 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 KCNA1Q09470 495 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 ZKSCAN8Q15776 578 aaPredicted RBP16.38■□□□□ 0.21
CHFR-223ENST00000544268 TDRD12Q587J7 1177 aaKnown RBP16.38■□□□□ 0.21
CHFR-223ENST00000544268 LRCH2Q5VUJ6 765 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 CACNA2D4Q7Z3S7 1137 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 CREG2Q8IUH2 290 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 LENG9Q96B70 501 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 MIEF2Q96C03 454 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 MS4A14Q96JA4 679 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 LSM14BQ9BX40 385 aaKnown RBP16.38■□□□□ 0.21
CHFR-223ENST00000544268 CAPS2Q9BXY5 557 aa16.38■□□□□ 0.21
CHFR-223ENST00000544268 PTPRFP10586 1907 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 GOLGA6CA6NDK9 693 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 ZBTB39O15060 712 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 CHUKO15111 745 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 FSBPO95073 299 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 GOLGA6DP0CG33 693 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 HNRNPH3P31942 346 aaKnown RBP16.37■□□□□ 0.21
CHFR-223ENST00000544268 ELF1P32519 619 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 UBXN2AP68543 259 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 SPIRE1Q08AE8 756 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 PTPROQ16827 1216 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 SH3D19Q5HYK7 790 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 PDXDC1Q6P996 788 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 CATSPERGQ6ZRH7 1159 aa16.37■□□□□ 0.21
CHFR-223ENST00000544268 PNMA8AQ86V59 439 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms