RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 CPLX3Q8WVH0 158 aa13.51□□□□□ -0.25
CHD7-211ENST00000532149 KIFAP3Q92845 792 aa13.51□□□□□ -0.25
CHD7-211ENST00000532149 ERO1AQ96HE7 468 aa13.51□□□□□ -0.25
CHD7-211ENST00000532149 EIF3CQ99613 913 aaKnown RBP13.51□□□□□ -0.25
CHD7-211ENST00000532149 GBP3Q9H0R5 595 aa13.51□□□□□ -0.25
CHD7-211ENST00000532149 COL20A1Q9P218 1284 aa13.51□□□□□ -0.25
CHD7-211ENST00000532149 SIK3Q9Y2K2 1263 aa13.51□□□□□ -0.25
CHD7-211ENST00000532149 FRMD4BQ9Y2L6 1034 aa13.51□□□□□ -0.25
CHD7-211ENST00000532149 USO1O60763 962 aaKnown RBP13.5□□□□□ -0.25
CHD7-211ENST00000532149 N4BP1O75113 896 aaKnown RBP13.5□□□□□ -0.25
CHD7-211ENST00000532149 DDNO94850 711 aaPredicted RBP13.5□□□□□ -0.25
CHD7-211ENST00000532149 NDUFA10O95299 355 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 SLU7O95391 586 aaKnown RBP13.5□□□□□ -0.25
CHD7-211ENST00000532149 CCDC172P0C7W6 258 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 CASQ1P31415 396 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 FKBP1BP68106 108 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 IRX3P78415 501 aaPredicted RBP13.5□□□□□ -0.25
CHD7-211ENST00000532149 CETN1Q12798 172 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 VGLL4Q14135 290 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 SPA17Q15506 151 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 C9orf131Q5VYM1 1079 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 PADI6Q6TGC4 694 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 CACNA2D4Q7Z3S7 1137 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 GJA10Q969M2 543 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 CCDC42Q96M95 316 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 TBC1D7Q9P0N9 293 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.5□□□□□ -0.25
CHD7-211ENST00000532149 DNAI1Q9UI46 699 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 PNMA3Q9UL41 463 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 SLC45A1Q9Y2W3 748 aa13.5□□□□□ -0.25
CHD7-211ENST00000532149 SSC5DA1L4H1 1573 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 ATP8B3O60423 1300 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 TESPA1A2RU30 521 aaPredicted RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 GLTPD2A6NH11 291 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 SPATA31C2B4DYI2 1134 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 KIAA0391O15091 583 aaKnown RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 P4HA2O15460 535 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 CHMP2AO43633 222 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 AFPP02771 609 aaKnown RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 NR3C1P04150 777 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 TUBBP07437 444 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 MYCLP12524 364 aaPredicted RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 PLS3P13797 630 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 EIF2AK2P19525 551 aaKnown RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 YWHABP31946 246 aaKnown RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 RARRES1P49788 294 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 MCCD1P59942 119 aaPredicted RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 NEDD9Q14511 834 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 ODR4Q5SWX8 454 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 MIS18BP1Q6P0N0 1132 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 TRIM65Q6PJ69 517 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 ZNF710Q8N1W2 664 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 PDCL2Q8N4E4 241 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 SHCBP1Q8NEM2 672 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 SPIRE2Q8WWL2 714 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 ACCSQ96QU6 501 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 NTPCRQ9BSD7 190 aaKnown RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 RUSC1Q9BVN2 902 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 STRA6Q9BX79 667 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 MROH8Q9H579 483 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 A1CFQ9NQ94 594 aaKnown RBP13.49□□□□□ -0.25
CHD7-211ENST00000532149 HOMER2Q9NSB8 354 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 AGTPBP1Q9UPW5 1226 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 LOC285556D6RIA3 1793 aa13.49□□□□□ -0.25
CHD7-211ENST00000532149 USP27XA6NNY8 438 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 STK25O00506 426 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 PMM2O15305 246 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 DGAT1O75907 488 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 GFPT2O94808 682 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 LCA5LO95447 670 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 EPHX2P34913 555 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 GNG11P61952 73 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 ITGB3BPQ13352 177 aaPredicted RBP13.48□□□□□ -0.25
CHD7-211ENST00000532149 LRRC41Q15345 812 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 SLC9C1Q4G0N8 1177 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 SLC30A10Q6XR72 485 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 SYT10Q6XYQ8 523 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 GBP6Q6ZN66 633 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 ANKRD35Q8N283 1001 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 PIGOQ8TEQ8 1089 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 ZNF592Q92610 1267 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 HPS3Q969F9 1004 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 MMRN2Q9H8L6 949 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 JPH1Q9HDC5 661 aaPredicted RBP13.48□□□□□ -0.25
CHD7-211ENST00000532149 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 SLC9A2Q9UBY0 812 aa13.48□□□□□ -0.25
CHD7-211ENST00000532149 POLR2AP24928 1970 aaKnown RBP13.48□□□□□ -0.25
CHD7-211ENST00000532149 SOWAHDA6NJG2 315 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 GAS2O43903 313 aaKnown RBP13.47□□□□□ -0.25
CHD7-211ENST00000532149 PPP1R37O75864 691 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 UBXN2AP68543 259 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 GTF2BQ00403 316 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 KCNH2Q12809 1159 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 XKR3Q5GH77 459 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 RAD9BQ6WBX8 426 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 INTS8Q75QN2 995 aaKnown RBP13.47□□□□□ -0.25
CHD7-211ENST00000532149 NELFCDQ8IXH7 590 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 SYCP3Q8IZU3 236 aa13.47□□□□□ -0.25
CHD7-211ENST00000532149 CALR3Q96L12 384 aaKnown RBP13.47□□□□□ -0.25
CHD7-211ENST00000532149 FAM81BQ96LP2 452 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms