RNA–Protein interactions for RNA: ENST00000528088.1

CCDC84-205, Transcript of coiled-coil domain containing 84, humanhuman

TSL 2

Gene CCDC84, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-205ENST00000528088 KCNMB3Q9NPA1 279 aa12.37□□□□□ -0.43
CCDC84-205ENST00000528088 ZNF302Q9NR11 478 aa12.37□□□□□ -0.43
CCDC84-205ENST00000528088 TRMT13Q9NUP7 481 aaKnown RBP12.37□□□□□ -0.43
CCDC84-205ENST00000528088 ERAP1Q9NZ08 941 aa12.37□□□□□ -0.43
CCDC84-205ENST00000528088 PCDHA12Q9UN75 941 aa12.37□□□□□ -0.43
CCDC84-205ENST00000528088 PCDHB6Q9Y5E3 794 aa12.37□□□□□ -0.43
CCDC84-205ENST00000528088 PCDHA10Q9Y5I2 948 aa12.37□□□□□ -0.43
CCDC84-205ENST00000528088 TRIP12Q14669 1992 aaPredicted RBP12.37□□□□□ -0.43
CCDC84-205ENST00000528088 PSMD10O75832 226 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 TOB1P50616 345 aaPredicted RBP12.36□□□□□ -0.43
CCDC84-205ENST00000528088 STAT5BP51692 787 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 RESTQ13127 1097 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 TMEM240Q5SV17 173 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 FAM109BQ6ICB4 259 aaPredicted RBP12.36□□□□□ -0.43
CCDC84-205ENST00000528088 HAS1Q92839 578 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 USB1Q9BQ65 265 aaKnown RBP12.36□□□□□ -0.43
CCDC84-205ENST00000528088 C16orf70Q9BSU1 422 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 TMEM60Q9H2L4 133 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 GABBR1Q9UBS5 961 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 CEP131Q9UPN4 1083 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 USTQ9Y2C2 406 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 EMSYQ7Z589 1322 aa12.36□□□□□ -0.43
CCDC84-205ENST00000528088 HRO43593 1189 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 ZSCAN22P10073 491 aaPredicted RBP12.35□□□□□ -0.43
CCDC84-205ENST00000528088 CYP2C9P11712 490 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
CCDC84-205ENST00000528088 CCL23P55773 120 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 IGBP1P78318 339 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 CEBPZQ03701 1054 aaKnown RBP12.35□□□□□ -0.43
CCDC84-205ENST00000528088 FAM173BQ6P4H8 233 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 NFRKBQ6P4R8 1299 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 ABHD15Q6UXT9 468 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 CCDC60Q8IWA6 550 aaPredicted RBP12.35□□□□□ -0.43
CCDC84-205ENST00000528088 KAT2BQ92831 832 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 TNPO1Q92973 898 aaKnown RBP12.35□□□□□ -0.43
CCDC84-205ENST00000528088 VWCEQ96DN2 955 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 GUCD1Q96NT3 240 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
CCDC84-205ENST00000528088 RAB34Q9BZG1 259 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 WNT8AQ9H1J5 351 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 HIPK3Q9H422 1215 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 HDAC6Q9UBN7 1215 aa12.35□□□□□ -0.43
CCDC84-205ENST00000528088 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
CCDC84-205ENST00000528088 C17orf102A2RUQ5 167 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 LGR5O75473 907 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 FBXO45P0C2W1 286 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 SMIM10L2AP0DMW4 78 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 SMIM10L2BP0DMW5 78 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 TECP42680 631 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PPFIA1Q13136 1202 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PPP2R5CQ13362 524 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PPIGQ13427 754 aaKnown RBP eCLIP12.34□□□□□ -0.432e-7■■■■□ 22.6
CCDC84-205ENST00000528088 ZNF365Q70YC5 407 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 RDM1Q8NG50 284 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 ATP6V0A1Q93050 837 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 SCLYQ96I15 445 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 HS3ST6Q96QI5 342 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 SEZ6LQ9BYH1 1024 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 GZF1Q9H116 711 aaPredicted RBP12.34□□□□□ -0.43
CCDC84-205ENST00000528088 TTYH1Q9H313 450 aaPredicted RBP12.34□□□□□ -0.43
CCDC84-205ENST00000528088 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.34□□□□□ -0.43
CCDC84-205ENST00000528088 VAV3Q9UKW4 847 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 POTEMA6NI47 508 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 GRXCR1A8MXD5 290 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 LAD1O00515 517 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 ATG7O95352 703 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 F13A1P00488 732 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 GNAT1P11488 350 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 SLC26A2P50443 739 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 SMAD3P84022 425 aaKnown RBP12.34□□□□□ -0.43
CCDC84-205ENST00000528088 CYP4A11Q02928 519 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PTPN11Q06124 597 aaPredicted RBP12.34□□□□□ -0.43
CCDC84-205ENST00000528088 NR1H3Q13133 447 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PKP1Q13835 747 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PTGISQ16647 500 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 DTHD1Q6ZMT9 781 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 TMEM199Q8N511 208 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 ERMNQ8TAM6 284 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 CCDC43Q96MW1 224 aaKnown RBP12.34□□□□□ -0.43
CCDC84-205ENST00000528088 ZNF396Q96N95 335 aaPredicted RBP12.34□□□□□ -0.43
CCDC84-205ENST00000528088 MTMR9Q96QG7 549 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PCYT2Q99447 389 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 PRR14Q9BWN1 585 aa12.34□□□□□ -0.43
CCDC84-205ENST00000528088 COL6A3P12111 3177 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 HAS3O00219 553 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 EML1O00423 815 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 DKC1O60832 514 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC84-205ENST00000528088 BMP15O95972 392 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 F12P00748 615 aaPredicted RBP12.33□□□□□ -0.44
CCDC84-205ENST00000528088 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
CCDC84-205ENST00000528088 PRKCEQ02156 737 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 PLCB4Q15147 1175 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 RASIP1Q5U651 963 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 GDF6Q6KF10 455 aaPredicted RBP12.33□□□□□ -0.44
CCDC84-205ENST00000528088 TPH2Q8IWU9 490 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 SCUBE3Q8IX30 993 aa12.33□□□□□ -0.44
CCDC84-205ENST00000528088 THAP11Q96EK4 314 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms