RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 DCXO43602 365 aa26.3■■□□□ 1.8
COL27A1-208ENST00000494780 GPR32O75388 356 aa26.3■■□□□ 1.8
COL27A1-208ENST00000494780 FAM228AQ86W67 206 aa26.3■■□□□ 1.8
COL27A1-208ENST00000494780 PPP1R16BQ96T49 567 aa26.3■■□□□ 1.8
COL27A1-208ENST00000494780 POP1Q99575 1024 aaKnown RBP26.3■■□□□ 1.8
COL27A1-208ENST00000494780 SLC26A6Q9BXS9 759 aa26.3■■□□□ 1.8
COL27A1-208ENST00000494780 UPF3BQ9BZI7 483 aaKnown RBP26.3■■□□□ 1.8
COL27A1-208ENST00000494780 AAASQ9NRG9 546 aa26.3■■□□□ 1.8
COL27A1-208ENST00000494780 SAMM50Q9Y512 469 aa26.3■■□□□ 1.8
COL27A1-208ENST00000494780 PCDHB12Q9Y5F1 795 aa26.3■■□□□ 1.8
COL27A1-208ENST00000494780 WDR64B1ANS9 1081 aa26.29■■□□□ 1.8
COL27A1-208ENST00000494780 REC8O95072 547 aa26.29■■□□□ 1.8
COL27A1-208ENST00000494780 VTNP04004 478 aa26.29■■□□□ 1.8
COL27A1-208ENST00000494780 IRS1P35568 1242 aa26.29■■□□□ 1.8
COL27A1-208ENST00000494780 EVCP57679 992 aa26.29■■□□□ 1.8
COL27A1-208ENST00000494780 UBE3AQ05086 875 aa26.29■■□□□ 1.8
COL27A1-208ENST00000494780 EFHBQ8N7U6 833 aa26.29■■□□□ 1.8
COL27A1-208ENST00000494780 SH3GLB2Q9NR46 395 aa26.29■■□□□ 1.8
COL27A1-208ENST00000494780 TBKBP1A7MCY6 615 aa26.28■■□□□ 1.8
COL27A1-208ENST00000494780 NDUFV1P49821 464 aa26.28■■□□□ 1.8
COL27A1-208ENST00000494780 FAM189BP81408 668 aa26.28■■□□□ 1.8
COL27A1-208ENST00000494780 SPOUT1Q5T280 376 aaKnown RBP26.28■■□□□ 1.8
COL27A1-208ENST00000494780 TRMT1LQ7Z2T5 733 aaKnown RBP26.28■■□□□ 1.8
COL27A1-208ENST00000494780 ADGRD2Q7Z7M1 963 aa26.28■■□□□ 1.8
COL27A1-208ENST00000494780 ZNF710Q8N1W2 664 aa26.28■■□□□ 1.8
COL27A1-208ENST00000494780 MSLNLQ96KJ4 702 aa26.28■■□□□ 1.8
COL27A1-208ENST00000494780 ELAC1Q9H777 363 aaKnown RBP26.28■■□□□ 1.8
COL27A1-208ENST00000494780 TMEM161AQ9NX61 479 aa26.28■■□□□ 1.8
COL27A1-208ENST00000494780 VPS54Q9P1Q0 977 aa26.28■■□□□ 1.8
COL27A1-208ENST00000494780 TMOD1P28289 359 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 PDIA3P30101 505 aaKnown RBP26.27■■□□□ 1.8
COL27A1-208ENST00000494780 USP11P51784 963 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 DSC3Q14574 896 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 CSPP1Q1MSJ5 1256 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 FAM102BQ5T8I3 360 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 LINC01465Q8N7H1 131 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 CCDC136Q96JN2 1154 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 MAP7D2Q96T17 732 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 RIT2Q99578 217 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 ATP6V0A4Q9HBG4 840 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 DISC1Q9NRI5 854 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 NRBP2Q9NSY0 501 aa26.27■■□□□ 1.8
COL27A1-208ENST00000494780 FNDC1Q4ZHG4 1894 aaPredicted RBP26.26■■□□□ 1.79
COL27A1-208ENST00000494780 MSH4O15457 936 aa26.26■■□□□ 1.79
COL27A1-208ENST00000494780 EDIL3O43854 480 aa26.26■■□□□ 1.79
COL27A1-208ENST00000494780 PPFIA3O75145 1194 aa26.26■■□□□ 1.79
COL27A1-208ENST00000494780 EYA4O95677 639 aa26.26■■□□□ 1.79
COL27A1-208ENST00000494780 CLCN3P51790 818 aa26.26■■□□□ 1.79
COL27A1-208ENST00000494780 EFCAB12Q6NXP0 572 aa26.26■■□□□ 1.79
COL27A1-208ENST00000494780 AKT3Q9Y243 479 aa26.26■■□□□ 1.79
COL27A1-208ENST00000494780 ZNF862O60290 1169 aa26.25■■□□□ 1.79
COL27A1-208ENST00000494780 OATP04181 439 aa26.25■■□□□ 1.79
COL27A1-208ENST00000494780 SFNP31947 248 aa26.25■■□□□ 1.79
COL27A1-208ENST00000494780 NRIP1P48552 1158 aa26.25■■□□□ 1.79
COL27A1-208ENST00000494780 JAK3P52333 1124 aa26.25■■□□□ 1.79
COL27A1-208ENST00000494780 NLRP11P59045 1033 aaKnown RBP26.25■■□□□ 1.79
COL27A1-208ENST00000494780 CCT2P78371 535 aaKnown RBP26.25■■□□□ 1.79
COL27A1-208ENST00000494780 SLC5A5Q92911 643 aa26.25■■□□□ 1.79
COL27A1-208ENST00000494780 ADAMTS10Q9H324 1103 aa26.25■■□□□ 1.79
COL27A1-208ENST00000494780 NCOA5Q9HCD5 579 aaKnown RBP26.25■■□□□ 1.79
COL27A1-208ENST00000494780 TYW1Q9NV66 732 aaKnown RBP26.25■■□□□ 1.79
COL27A1-208ENST00000494780 CLEC1BQ9P126 229 aa26.25■■□□□ 1.79
COL27A1-208ENST00000494780 PLXNA4Q9HCM2 1894 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 GAS7O60861 476 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 FGF18O76093 207 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 NLRP5P59047 1200 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 COASYQ13057 564 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 RBM23Q86U06 439 aaKnown RBP26.24■■□□□ 1.79
COL27A1-208ENST00000494780 TRIM22Q8IYM9 498 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 COLGALT1Q8NBJ5 622 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 MICAL1Q8TDZ2 1067 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 C22orf23Q9BZE7 217 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 TLR9Q9NR96 1032 aa26.24■■□□□ 1.79
COL27A1-208ENST00000494780 HOXA2O43364 376 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 EPB41L2O43491 1005 aaKnown RBP26.23■■□□□ 1.79
COL27A1-208ENST00000494780 FGFR1P11362 822 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 LAG3P18627 525 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 PRKCEQ02156 737 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 RUFY3Q7L099 469 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 THNSL1Q8IYQ7 743 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 LRRC71Q8N4P6 559 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 TEKT3Q9BXF9 490 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 TMEM117Q9H0C3 514 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 CWH43Q9H720 699 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 TLE6Q9H808 572 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 PCDHGC5Q9Y5F6 944 aa26.23■■□□□ 1.79
COL27A1-208ENST00000494780 FSD2A1L4K1 749 aa26.22■■□□□ 1.79
COL27A1-208ENST00000494780 ZSCAN20P17040 1043 aaPredicted RBP26.22■■□□□ 1.79
COL27A1-208ENST00000494780 EIF4BP23588 611 aaKnown RBP26.22■■□□□ 1.79
COL27A1-208ENST00000494780 LRCH2Q5VUJ6 765 aa26.22■■□□□ 1.79
COL27A1-208ENST00000494780 PDE12Q6L8Q7 609 aaKnown RBP26.22■■□□□ 1.79
COL27A1-208ENST00000494780 SMRP1Q8NCR6 262 aa26.22■■□□□ 1.79
COL27A1-208ENST00000494780 TBCKQ8TEA7 893 aa26.22■■□□□ 1.79
COL27A1-208ENST00000494780 UNC45AQ9H3U1 944 aa26.22■■□□□ 1.79
COL27A1-208ENST00000494780 ZSWIM6Q9HCJ5 1215 aa26.22■■□□□ 1.79
COL27A1-208ENST00000494780 WDR81Q562E7 1941 aa26.22■■□□□ 1.79
COL27A1-208ENST00000494780 CHMP2AO43633 222 aa26.21■■□□□ 1.79
COL27A1-208ENST00000494780 GLP2RO95838 553 aa26.21■■□□□ 1.79
COL27A1-208ENST00000494780 HOXD11P31277 338 aaPredicted RBP26.21■■□□□ 1.79
COL27A1-208ENST00000494780 SSRP1Q08945 709 aaKnown RBP26.21■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms