RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 CCDC155Q8N6L0 562 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 MTRQ99707 1265 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 FAM49AQ9H0Q0 323 aaPredicted RBP16.2■□□□□ 0.18
BRCA1-223ENST00000494123 BLOC1S4Q9NUP1 217 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 ALPK3Q96L96 1907 aa16.2■□□□□ 0.18
BRCA1-223ENST00000494123 SMIM35A0A1B0GVV1 85 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 CLTBP09497 229 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 SYKP43405 635 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 DNM2P50570 870 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 NDUFA8P51970 172 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 FAAP100Q0VG06 881 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 MCM6Q14566 821 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 RUFY4Q6ZNE9 571 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 RSPH3Q86UC2 560 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 LRRC71Q8N4P6 559 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 SYT2Q8N9I0 419 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-223ENST00000494123 DPF3Q92784 378 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 CEP89Q96ST8 783 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 MAP7D2Q96T17 732 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 CUEDC2Q9H467 287 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 DHX33Q9H6R0 707 aaKnown RBP16.19■□□□□ 0.18
BRCA1-223ENST00000494123 PRDM5Q9NQX1 630 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-223ENST00000494123 TMEM39AQ9NV64 488 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 EVPLQ92817 2033 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 GAS2O43903 313 aaKnown RBP16.19■□□□□ 0.18
BRCA1-223ENST00000494123 EVI5O60447 810 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 GADD45BO75293 160 aaPredicted RBP16.19■□□□□ 0.18
BRCA1-223ENST00000494123 UBE2HP62256 183 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 NAALADL2Q58DX5 795 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 SV2BQ7L1I2 683 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 GPBP1Q86WP2 473 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 CEP57L1Q8IYX8 460 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 C7orf61Q8IZ16 206 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 MCPH1Q8NEM0 835 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 LRRC15Q8TF66 581 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 CTAGE1Q96RT6 745 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 GOLPH3LQ9H4A5 285 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 PRKAG2Q9UGJ0 569 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 HPSEQ9Y251 543 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 DNAH12Q6ZR08 3092 aa16.19■□□□□ 0.18
BRCA1-223ENST00000494123 FAM237AA0A1B0GTK4 181 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 RPLP2P05387 115 aaKnown RBP16.18■□□□□ 0.18
BRCA1-223ENST00000494123 KRT18P05783 430 aaKnown RBP16.18■□□□□ 0.18
BRCA1-223ENST00000494123 CLCN3P51790 818 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 SLC12A3P55017 1021 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 E2F4Q16254 413 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 MAEAQ7L5Y9 396 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 CAGE1Q8TC20 777 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 DNAJB3Q8WWF6 145 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 TCP11Q8WWU5 503 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 KCND2Q9NZV8 630 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 AKT3Q9Y243 479 aa16.18■□□□□ 0.18
BRCA1-223ENST00000494123 IGKV6-21A0A0C4DH24 114 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 CYP11B2P19099 503 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 THPOP40225 353 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 BFSP2Q13515 415 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 FAM102BQ5T8I3 360 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 RINT1Q6NUQ1 792 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 TMEM143Q96AN5 459 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 RUSC1Q9BVN2 902 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 LRRC27Q9C0I9 530 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 MAGEF1Q9HAY2 307 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 PDLIM7Q9NR12 457 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 USP25Q9UHP3 1055 aa16.17■□□□□ 0.18
BRCA1-223ENST00000494123 M0QZ92 97 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 AMPD3Q01432 767 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 FAM160A1Q05DH4 1040 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 IER5Q5VY09 327 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 KIAA0319LQ8IZA0 1049 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 NME8Q8N427 588 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 PSPC1Q8WXF1 523 aaKnown RBP16.16■□□□□ 0.18
BRCA1-223ENST00000494123 DHX38Q92620 1227 aaKnown RBP16.16■□□□□ 0.18
BRCA1-223ENST00000494123 WNT8BQ93098 351 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 PPP1R12CQ9BZL4 782 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 TNMDQ9H2S6 317 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 HIPK3Q9H422 1215 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 XPNPEP1Q9NQW7 623 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 SUCLA2Q9P2R7 463 aaPredicted RBP16.16■□□□□ 0.18
BRCA1-223ENST00000494123 SERTAD1Q9UHV2 236 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 CAND2O75155 1236 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 ZNF202O95125 648 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 VTNP04004 478 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 SLFN14P0C7P3 912 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 RAD51AP2Q09MP3 1159 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 TMEM62Q0P6H9 643 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 DRP2Q13474 957 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 LONRF3Q496Y0 759 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 C1orf186Q6ZWK4 172 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 CNNM3Q8NE01 707 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 CCDC34Q96HJ3 373 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 SCLT1Q96NL6 688 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 TIPINQ9BVW5 301 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 POLR3FQ9H1D9 316 aaPredicted RBP16.16■□□□□ 0.18
BRCA1-223ENST00000494123 TBX21Q9UL17 535 aa16.16■□□□□ 0.18
BRCA1-223ENST00000494123 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.15■□□□□ 0.18
BRCA1-223ENST00000494123 PITPNM1O00562 1244 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 CTSHP09668 335 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 CKBP12277 381 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 RAG1P15918 1043 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms