RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 GUCY2CP25092 1073 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 MDM2Q00987 491 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-210ENST00000449116 CUL4BQ13620 913 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 ITGA7Q13683 1181 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 EMC2Q15006 297 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 CAMK4Q16566 473 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 CCDC183Q5T5S1 534 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 CAVIN1Q6NZI2 390 aaKnown RBP16.26■□□□□ 0.19
SHANK2-210ENST00000449116 CNNM4Q6P4Q7 775 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 NFRKBQ6P4R8 1299 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 SESTD1Q86VW0 696 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 MCPH1Q8NEM0 835 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 LMBR1Q8WVP7 490 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 TRAPPC12Q8WVT3 735 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 DDX12PQ92771 950 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 JPH2Q9BR39 696 aaPredicted RBP16.26■□□□□ 0.19
SHANK2-210ENST00000449116 TIPINQ9BVW5 301 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 BLZF1Q9H2G9 400 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 GTF2IRD1Q9UHL9 959 aa16.26■□□□□ 0.19
SHANK2-210ENST00000449116 GRIN2DO15399 1336 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 ARID2Q68CP9 1835 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 C22orf31O95567 290 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 PRR29P0C7W0 189 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 CASP1P29466 404 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 HOXC8P31273 242 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 MNX1P50219 401 aaPredicted RBP16.25■□□□□ 0.19
SHANK2-210ENST00000449116 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
SHANK2-210ENST00000449116 DPYDQ12882 1025 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 PNOCQ13519 176 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 GIT2Q14161 759 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 FAM47CQ5HY64 1035 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 MARCH8Q5T0T0 291 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 MTHFD1LQ6UB35 978 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 DYMQ7RTS9 669 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 PPP1R13LQ8WUF5 828 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 DNAJC19Q96DA6 116 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 REEP2Q9BRK0 252 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 SEZ6LQ9BYH1 1024 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 PDLIM7Q9NR12 457 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 TMEM63CQ9P1W3 806 aa16.25■□□□□ 0.19
SHANK2-210ENST00000449116 IGKV6-21A0A0C4DH24 114 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 NPHP3-ACAD11A0A0J9YXS1 232 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 MBLAC1A4D2B0 266 aaPredicted RBP16.24■□□□□ 0.19
SHANK2-210ENST00000449116 GAS2O43903 313 aaKnown RBP16.24■□□□□ 0.19
SHANK2-210ENST00000449116 KLRC1P26715 233 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 ASIC1P78348 528 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 ADAM17P78536 824 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 RAD51AP2Q09MP3 1159 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 RETREG2Q8NC44 543 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 XPNPEP1Q9NQW7 623 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 TUBE1Q9UJT0 475 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 ODF2LQ9ULJ1 636 aa16.24■□□□□ 0.19
SHANK2-210ENST00000449116 ARVCFO00192 962 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 HIP1RO75146 1068 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 TBCAO75347 108 aaKnown RBP16.23■□□□□ 0.19
SHANK2-210ENST00000449116 SMC2O95347 1197 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
SHANK2-210ENST00000449116 HIC1Q14526 733 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 FAM102BQ5T8I3 360 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 EFCAB12Q6NXP0 572 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 UNC13DQ70J99 1090 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 MAEAQ7L5Y9 396 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 SLC43A3Q8NBI5 491 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 KIFAP3Q92845 792 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 ERCC4Q92889 916 aaPredicted RBP16.23■□□□□ 0.19
SHANK2-210ENST00000449116 DRC1Q96MC2 740 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 SENP6Q9GZR1 1112 aaPredicted RBP16.23■□□□□ 0.19
SHANK2-210ENST00000449116 SUGCTQ9HAC7 445 aa16.23■□□□□ 0.19
SHANK2-210ENST00000449116 PVALEFA0A1B0GWK0 134 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 FRMD3A2A2Y4 597 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 TREHO43280 583 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 FAM13AO94988 1023 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 RPN1P04843 607 aaKnown RBP16.22■□□□□ 0.19
SHANK2-210ENST00000449116 COL6A1P12109 1028 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 IDEP14735 1019 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 TMOD1P28289 359 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 ZNF200P98182 395 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-210ENST00000449116 MAPK7Q13164 816 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 NT5DC1Q5TFE4 455 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-210ENST00000449116 RBM43Q6ZSC3 357 aaKnown RBP16.22■□□□□ 0.19
SHANK2-210ENST00000449116 CCDC65Q8IXS2 484 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 LRRC71Q8N4P6 559 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 METTL13Q8N6R0 699 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 LINC01465Q8N7H1 131 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 SPATA20Q8TB22 786 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 DIS3LQ8TF46 1054 aaKnown RBP16.22■□□□□ 0.19
SHANK2-210ENST00000449116 TCP11Q8WWU5 503 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 SMARCE1Q969G3 411 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 TMEM143Q96AN5 459 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 ZBTB10Q96DT7 871 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 POLR3FQ9H1D9 316 aaPredicted RBP16.22■□□□□ 0.19
SHANK2-210ENST00000449116 GPRC5CQ9NQ84 441 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 PANK4Q9NVE7 773 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 KIAA1468Q9P260 1216 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 PCDHA5Q9Y5H7 936 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 PCDHA2Q9Y5H9 948 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 COL4A3BPQ9Y5P4 624 aa16.22■□□□□ 0.19
SHANK2-210ENST00000449116 KIAA0100Q14667 2235 aaKnown RBP16.21■□□□□ 0.19
SHANK2-210ENST00000449116 SMIM35A0A1B0GVV1 85 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms