RNA–Protein interactions for RNA: ENST00000374826.8

PMS1-202, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best) BASIC

Gene PMS1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-202ENST00000374826 SYNMO15061 1565 aa6.44□□□□□ -1.38
PMS1-202ENST00000374826 NAIPQ13075 1403 aa6.43□□□□□ -1.38
PMS1-202ENST00000374826 PZPP20742 1482 aa6.43□□□□□ -1.38
PMS1-202ENST00000374826 LMTK3Q96Q04 1460 aa6.43□□□□□ -1.38
PMS1-202ENST00000374826 TRBV23-1A0A0A0MS06 115 aa6.43□□□□□ -1.38
PMS1-202ENST00000374826 DIAPH1O60610 1272 aaKnown RBP6.43□□□□□ -1.38
PMS1-202ENST00000374826 KRTAP1-1Q07627 177 aa6.43□□□□□ -1.38
PMS1-202ENST00000374826 FOXE3Q13461 319 aa6.43□□□□□ -1.38
PMS1-202ENST00000374826 PRKD1Q15139 912 aaPredicted RBP6.43□□□□□ -1.38
PMS1-202ENST00000374826 SF3A1Q15459 793 aaKnown RBP6.43□□□□□ -1.38
PMS1-202ENST00000374826 RBM12BQ8IXT5 1001 aaKnown RBP6.43□□□□□ -1.38
PMS1-202ENST00000374826 ZBTB38Q8NAP3 1195 aaPredicted RBP6.43□□□□□ -1.38
PMS1-202ENST00000374826 LMF1Q96S06 567 aa6.43□□□□□ -1.38
PMS1-202ENST00000374826 PDGFDQ9GZP0 370 aaPredicted RBP6.43□□□□□ -1.38
PMS1-202ENST00000374826 SPATA31D1Q6ZQQ2 1576 aa6.43□□□□□ -1.38
PMS1-202ENST00000374826 HFM1A2PYH4 1435 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 LMTK2Q8IWU2 1503 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 NPIPB8E9PQR5 432 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 FBXO21O94952 628 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 SOD2P04179 222 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 GNAT1P11488 350 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 CSF2RBP32927 897 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 SUMO1P63165 101 aaKnown RBP6.42□□□□□ -1.38
PMS1-202ENST00000374826 FOXB2Q5VYV0 432 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 OTOP3Q7RTS5 596 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 SCUBE1Q8IWY4 988 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 IPO9Q96P70 1041 aaKnown RBP6.42□□□□□ -1.38
PMS1-202ENST00000374826 DEPDC7Q96QD5 511 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 SNTG2Q9NY99 539 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 TRAF6Q9Y4K3 522 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 KDM2BQ8NHM5 1336 aa6.42□□□□□ -1.38
PMS1-202ENST00000374826 KDM5AP29375 1690 aaKnown RBP6.42□□□□□ -1.38
PMS1-202ENST00000374826 ERVK-7P63135 1459 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 ENO2P09104 434 aaPredicted RBP6.41□□□□□ -1.38
PMS1-202ENST00000374826 FAHP16930 419 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 GLRBP48167 497 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 TGFB2P61812 414 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 SPIRE1Q08AE8 756 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 SKIDA1Q1XH10 827 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 PAN2Q504Q3 1202 aaKnown RBP6.41□□□□□ -1.38
PMS1-202ENST00000374826 FAM209AQ5JX71 171 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 MAMDC2Q7Z304 686 aaPredicted RBP6.41□□□□□ -1.38
PMS1-202ENST00000374826 LRP10Q7Z4F1 713 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 TAX1BP1Q86VP1 789 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 GIMAP8Q8ND71 665 aaPredicted RBP6.41□□□□□ -1.38
PMS1-202ENST00000374826 KCNJ15Q99712 375 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 ALG1Q9BT22 464 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 KATNBL1Q9H079 304 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 IPPKQ9H8X2 491 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 KCND1Q9NSA2 647 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 ZFP69BQ9UJL9 534 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 ZFR2Q9UPR6 939 aaKnown RBP6.41□□□□□ -1.38
PMS1-202ENST00000374826 WASHC2CQ9Y4E1 1318 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 ZMYM3Q14202 1370 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 KANK1Q14678 1352 aa6.41□□□□□ -1.38
PMS1-202ENST00000374826 CLTCL1P53675 1640 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 FAM221BA6H8Z2 402 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 FAM47E-STBD1D6RA91 191 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 AQP7O14520 342 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 FAM153BP0C7A2 387 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 COL6A2P12110 1019 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 PFKPQ01813 784 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 TUSC3Q13454 348 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 MIIPQ5JXC2 388 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 GPR155Q7Z3F1 870 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 STPG3Q8N7X2 389 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 UHMK1Q8TAS1 419 aaKnown RBP6.4□□□□□ -1.38
PMS1-202ENST00000374826 PMFBP1Q8TBY8 1022 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 PTPRN2Q92932 1015 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 ZNF503Q96F45 646 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 EXOC2Q96KP1 924 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 LRRC37BQ96QE4 947 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 ADOQ96SZ5 270 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 ARHGAP20Q9P2F6 1191 aa6.4□□□□□ -1.38
PMS1-202ENST00000374826 NPATQ14207 1427 aa6.4□□□□□ -1.39
PMS1-202ENST00000374826 UHRF1BP1Q6BDS2 1440 aa6.4□□□□□ -1.39
PMS1-202ENST00000374826 UGGT1Q9NYU2 1555 aa6.4□□□□□ -1.39
PMS1-202ENST00000374826 PLSCR1O15162 318 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 NKRFO15226 690 aaKnown RBP eCLIP6.39□□□□□ -1.39
PMS1-202ENST00000374826 LTFP02788 710 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 C6orf222P0C671 652 aaPredicted RBP6.39□□□□□ -1.39
PMS1-202ENST00000374826 FHL2Q14192 279 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 LONRF2Q1L5Z9 754 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 HABP4Q5JVS0 413 aaKnown RBP6.39□□□□□ -1.39
PMS1-202ENST00000374826 SOGA3Q5TF21 947 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 AGBL4Q5VU57 503 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 RNF207Q6ZRF8 634 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 MTDHQ86UE4 582 aaKnown RBP6.39□□□□□ -1.39
PMS1-202ENST00000374826 REXO1L1PQ8IX06 675 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 EDAQ92838 391 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 NEIL1Q96FI4 390 aaPredicted RBP6.39□□□□□ -1.39
PMS1-202ENST00000374826 SRPK1Q96SB4 655 aaKnown RBP6.39□□□□□ -1.39
PMS1-202ENST00000374826 NUB1Q9Y5A7 615 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 IFT172Q9UG01 1749 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 PPLO60437 1756 aa6.39□□□□□ -1.39
PMS1-202ENST00000374826 IL18BPO95998 194 aa6.38□□□□□ -1.39
PMS1-202ENST00000374826 NRN1LQ496H8 165 aa6.38□□□□□ -1.39
PMS1-202ENST00000374826 IFNL2Q8IZJ0 200 aa6.38□□□□□ -1.39
PMS1-202ENST00000374826 MKL1Q969V6 931 aa6.38□□□□□ -1.39
PMS1-202ENST00000374826 DHRS4Q9BTZ2 278 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms