RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 MCPH1Q8NEM0 835 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 SCFD1Q8WVM8 642 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 BBXQ8WY36 941 aaPredicted RBP17.25■□□□□ 0.35
CTSA-202ENST00000354880 PDLIM7Q9NR12 457 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 GNEQ9Y223 722 aaKnown RBP17.25■□□□□ 0.35
CTSA-202ENST00000354880 HTTP42858 3142 aa17.25■□□□□ 0.35
CTSA-202ENST00000354880 CASP8AP2Q9UKL3 1982 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 PPFIA4O75335 1185 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 GCNT3O95395 438 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 LGALS2P05162 132 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 MARK3P27448 753 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 HSP90AA4PQ58FG1 418 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 ANKRD40Q6AI12 368 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 ATP8B4Q8TF62 1192 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 TRIB2Q92519 343 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 FIZ1Q96SL8 496 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 SEMA6BQ9H3T3 888 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 ATP6V0A4Q9HBG4 840 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 NRBP1Q9UHY1 535 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 CEP350Q5VT06 3117 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 GPR25O00155 361 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 MYBP10242 640 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 PLS3P13797 630 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 CDK11BP21127 795 aaKnown RBP17.24■□□□□ 0.35
CTSA-202ENST00000354880 POLGP54098 1239 aaPredicted RBP17.24■□□□□ 0.35
CTSA-202ENST00000354880 LRRC63Q05C16 580 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 TARBP2Q15633 366 aaKnown RBP17.24■□□□□ 0.35
CTSA-202ENST00000354880 MFSD14CQ5VZR4 134 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 KIFAP3Q92845 792 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 PDLIM2Q96JY6 352 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 CEP89Q96ST8 783 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 DHX33Q9H6R0 707 aaKnown RBP17.24■□□□□ 0.35
CTSA-202ENST00000354880 GPRC5CQ9NQ84 441 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 ERAP1Q9NZ08 941 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 FAM184BQ9ULE4 1060 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 PPME1Q9Y570 386 aa17.24■□□□□ 0.35
CTSA-202ENST00000354880 EIF3DO15371 548 aaKnown RBP eCLIP17.23■□□□□ 0.35
CTSA-202ENST00000354880 DYNC1LI2O43237 492 aaPredicted RBP17.23■□□□□ 0.35
CTSA-202ENST00000354880 HOXD8P13378 290 aaPredicted RBP17.23■□□□□ 0.35
CTSA-202ENST00000354880 HOXD10P28358 340 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 NMT1P30419 496 aaKnown RBP17.23■□□□□ 0.35
CTSA-202ENST00000354880 PLCB4Q15147 1175 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 CDKAL1Q5VV42 579 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 FOXR2Q6PJQ5 311 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 ZNF720Q7Z2F6 126 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 NELFCDQ8IXH7 590 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 CD99L2Q8TCZ2 262 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 SLC7A3Q8WY07 619 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 PPP1R9BQ96SB3 815 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 DUSP9Q99956 384 aaKnown RBP17.23■□□□□ 0.35
CTSA-202ENST00000354880 XPNPEP1Q9NQW7 623 aa17.23■□□□□ 0.35
CTSA-202ENST00000354880 MMP3P08254 477 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 MAPTP10636 758 aaKnown RBP17.22■□□□□ 0.35
CTSA-202ENST00000354880 RFC5P40937 340 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 ZNF75DP51815 510 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 FANCCQ00597 558 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 EMC2Q15006 297 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 DGKDQ16760 1214 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 BMT2Q1RMZ1 405 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 STXBP4Q6ZWJ1 553 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 TLK2Q86UE8 772 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 CSGALNACT2Q8N6G5 542 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 ZNF507Q8TCN5 953 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 TSG101Q99816 390 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 C17orf75Q9HAS0 396 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 SAGE1Q9NXZ1 904 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 SRRDQ9UH36 339 aa17.22■□□□□ 0.35
CTSA-202ENST00000354880 HBP1O60381 514 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 PRPF6O94906 941 aaKnown RBP17.21■□□□□ 0.35
CTSA-202ENST00000354880 SERPINC1P01008 464 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 AKR1A1P14550 325 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 KNOP1Q1ED39 458 aaKnown RBP17.21■□□□□ 0.35
CTSA-202ENST00000354880 ZCWPW2Q504Y3 356 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 NOC3LQ8WTT2 800 aaKnown RBP17.21■□□□□ 0.35
CTSA-202ENST00000354880 SRRTQ9BXP5 876 aaKnown RBP17.21■□□□□ 0.35
CTSA-202ENST00000354880 KCTD10Q9H3F6 313 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 THAP9Q9H5L6 903 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 ZNF215Q9UL58 517 aaPredicted RBP17.21■□□□□ 0.35
CTSA-202ENST00000354880 TRPC6Q9Y210 931 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 Q9Y3F1 56 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 PCDHB13Q9Y5F0 798 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 A6NJR5 290 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 K7ENM7 598 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 ZNF286BP0CG31 522 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 CYBAP13498 195 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 PEX3P56589 373 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 SOX10P56693 466 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 RTP1P59025 263 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 SLC17A8Q8NDX2 589 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 LENG1Q96BZ8 264 aaPredicted RBP17.21■□□□□ 0.35
CTSA-202ENST00000354880 C16orf70Q9BSU1 422 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 IFNKQ9P0W0 207 aa17.21■□□□□ 0.35
CTSA-202ENST00000354880 UBE4BO95155 1302 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 MAFO75444 373 aaPredicted RBP17.2■□□□□ 0.34
CTSA-202ENST00000354880 GNRH1P01148 92 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 HOXD13P35453 343 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 UBASH3AP57075 661 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 SPAG1Q07617 926 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 TBC1D8BQ0IIM8 1120 aa17.2■□□□□ 0.34
CTSA-202ENST00000354880 DMP1Q13316 513 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 174.2 ms