RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 PIAS4Q8N2W9 510 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 TTLL6Q8N841 843 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 GBP7Q8N8V2 638 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 CCDC197Q8NCU1 140 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 STAMQ92783 540 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 MS4A14Q96JA4 679 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 LY9Q9HBG7 655 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 DMAP1Q9NPF5 467 aaPredicted RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 AGAP1Q9UPQ3 857 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 BCS1LQ9Y276 419 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 R3HDM2Q9Y2K5 976 aaKnown RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 DAGLAQ9Y4D2 1042 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 MYH2Q9UKX2 1941 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 YDJCA8MPS7 323 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 DCDC2CA8MYV0 355 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 IGF2BP3O00425 579 aaKnown RBP eCLIP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 HEXIM1O94992 359 aaKnown RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 PSMD7P51665 324 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 CYP4A11Q02928 519 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 TTC30BQ8N4P2 665 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 TEX9Q8N6V9 391 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 ABHD8Q96I13 439 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 COA1Q9GZY4 146 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 RBM12Q9NTZ6 932 aaKnown RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 CNOT8Q9UFF9 292 aaKnown RBP11.16□□□□□ -0.62
SF3B2-201ENST00000322535 CD2APQ9Y5K6 639 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 CENPFP49454 3210 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 DOCK2Q92608 1830 aa11.16□□□□□ -0.62
SF3B2-201ENST00000322535 SH2B2O14492 632 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 VIMP08670 466 aaKnown RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 PDE6CP51160 858 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 IGBP1P78318 339 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 KIF23Q02241 960 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 GSTM4Q03013 218 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 RIPK1Q13546 671 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 SHROOM1Q2M3G4 852 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 FAM117BQ6P1L5 589 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 APOA5Q6Q788 366 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 CREG2Q8IUH2 290 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 ANKS4BQ8N8V4 417 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 C7orf43Q8WVR3 580 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 ELAC2Q9BQ52 826 aaKnown RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 DDX4Q9NQI0 724 aaKnown RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 PNMA2Q9UL42 364 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 HPSEQ9Y251 543 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 SH3GLB1Q9Y371 365 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 USH1CQ9Y6N9 552 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 TNKSO95271 1327 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 DUOX1Q9NRD9 1551 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 HTR3EA5X5Y0 456 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 TSPY2A6NKD2 308 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 GNA14O95837 355 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 PDGFRBP09619 1106 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 CD44P16070 742 aaKnown RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 GSTT1P30711 240 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 METAP2P50579 478 aaKnown RBP eCLIP11.15□□□□□ -0.621e-7■■□□□ 13.6
SF3B2-201ENST00000322535 UBXN1Q04323 297 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 FAM47EQ6ZV65 393 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 APTXQ7Z2E3 356 aaKnown RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 LMNTD2Q8IXW0 634 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 ANKRD13CQ8N6S4 541 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 ABTB1Q969K4 478 aaPredicted RBP11.15□□□□□ -0.62
SF3B2-201ENST00000322535 IFT43Q96FT9 208 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 HEY1Q9Y5J3 304 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 SLC12A7Q9Y666 1083 aa11.15□□□□□ -0.62
SF3B2-201ENST00000322535 CTNND1O60716 968 aaKnown RBP11.15□□□□□ -0.63
SF3B2-201ENST00000322535 BAG3O95817 575 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 CCDC166P0CW27 439 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 CCND1P24385 295 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 GUCY1A2P33402 732 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 LBRQ14739 615 aaKnown RBP11.15□□□□□ -0.63
SF3B2-201ENST00000322535 WTAPQ15007 396 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 ALX1Q15699 326 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 RESP18Q5W5W9 173 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 SLC2A7Q6PXP3 512 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 IFT20Q8IY31 132 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 LARGE2Q8N3Y3 721 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.15□□□□□ -0.631e-6■■■□□ 15.3
SF3B2-201ENST00000322535 NLGN2Q8NFZ4 835 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 DEPTORQ8TB45 409 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 CCDC51Q96ER9 411 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 EEF2KMTQ96G04 330 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 LBHD1Q9BQE6 289 aaPredicted RBP11.15□□□□□ -0.63
SF3B2-201ENST00000322535 CPVLQ9H3G5 476 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 TAF1DQ9H5J8 278 aaPredicted RBP11.15□□□□□ -0.63
SF3B2-201ENST00000322535 MKNK2Q9HBH9 465 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 ZMYND8Q9ULU4 1186 aaPredicted RBP11.15□□□□□ -0.63
SF3B2-201ENST00000322535 TRIM33Q9UPN9 1127 aa11.15□□□□□ -0.63
SF3B2-201ENST00000322535 ITIH6Q6UXX5 1313 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 PAFAH1B1P43034 410 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 MAGOHP61326 146 aaKnown RBP11.14□□□□□ -0.63
SF3B2-201ENST00000322535 MRPS35P82673 323 aaKnown RBP11.14□□□□□ -0.63
SF3B2-201ENST00000322535 KLC1Q07866 573 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 OR52E8Q6IFG1 317 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 STYK1Q6J9G0 422 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 MAMSTRQ6ZN01 415 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 PEX5LQ8IYB4 626 aa11.14□□□□□ -0.63
SF3B2-201ENST00000322535 MMGT1Q8N4V1 131 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 229.2 ms