RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 PIK3CDO00329 1044 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 SART1O43290 800 aaKnown RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 SLITRK3O94933 977 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 FAM13AO94988 1023 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 FERP16591 822 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 ECHS1P30084 290 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 NMT1P30419 496 aaKnown RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 JAG1P78504 1218 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 CUL1Q13616 776 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 SLC15A2Q16348 729 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 STRIP1Q5VSL9 837 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 C1orf186Q6ZWK4 172 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 OTOP1Q7RTM1 612 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 EFCAB13Q8IY85 973 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 MYCT1Q8N699 235 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 U2AF1L4Q8WU68 220 aaKnown RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 AP1M1Q9BXS5 423 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 FAM107BQ9H098 131 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 IKZF4Q9H2S9 585 aa16.62■□□□□ 0.25
DDX56-201ENST00000258772 SUCLA2Q9P2R7 463 aaPredicted RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 NOC2LQ9Y3T9 749 aaKnown RBP16.62■□□□□ 0.25
DDX56-201ENST00000258772 ZMYM2Q9UBW7 1377 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 BHMG1C9JSJ3 638 aaPredicted RBP16.61■□□□□ 0.25
DDX56-201ENST00000258772 GFPT2O94808 682 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 PSMC2P35998 433 aaKnown RBP16.61■□□□□ 0.25
DDX56-201ENST00000258772 STAT1P42224 750 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 NPEPPSP55786 919 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 HLTFQ14527 1009 aaKnown RBP eCLIP16.61■□□□□ 0.25
DDX56-201ENST00000258772 NFIL3Q16649 462 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 TPH2Q8IWU9 490 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 FAM186BQ8IYM0 893 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 CCDC188H7C350 402 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 EVI5O60447 810 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 GH2P01242 217 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 ZC2HC1CQ53FD0 456 aaPredicted RBP16.61■□□□□ 0.25
DDX56-201ENST00000258772 DACT2Q5SW24 774 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 SLC30A10Q6XR72 485 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 NT5DC3Q86UY8 548 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 SYCE1Q8N0S2 351 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 RASGEF1CQ8N431 466 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 SLC30A5Q8TAD4 765 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 PPM1EQ8WY54 764 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 ATP6V1G3Q96LB4 118 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 RNPC3Q96LT9 517 aaKnown RBP16.61■□□□□ 0.25
DDX56-201ENST00000258772 WDR18Q9BV38 432 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 TUFT1Q9NNX1 390 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 PRR12Q9ULL5 1215 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 PLAAQ9Y263 795 aa16.61■□□□□ 0.25
DDX56-201ENST00000258772 SCN9AQ15858 1988 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 A0A087WUV0 522 aaPredicted RBP16.6■□□□□ 0.25
DDX56-201ENST00000258772 KRIT1O00522 736 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 ZBTB39O15060 712 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 PPP1R12BO60237 982 aaPredicted RBP16.6■□□□□ 0.25
DDX56-201ENST00000258772 GALCP54803 685 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 FKBP1AP62942 108 aaKnown RBP16.6■□□□□ 0.25
DDX56-201ENST00000258772 DAAM2Q86T65 1068 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 NLGN1Q8N2Q7 840 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 OLIG1Q8TAK6 271 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 LNX1Q8TBB1 728 aaPredicted RBP16.6■□□□□ 0.25
DDX56-201ENST00000258772 MASTLQ96GX5 879 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 DYDC2Q96IM9 177 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 DDX47Q9H0S4 455 aaKnown RBP16.6■□□□□ 0.25
DDX56-201ENST00000258772 FAM169AQ9Y6X4 670 aa16.6■□□□□ 0.25
DDX56-201ENST00000258772 A0A1W2PRG0 241 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 NR1D1P20393 614 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 SOX5P35711 763 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 PDE6BP35913 854 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 FMO5P49326 533 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 CEP85LQ5SZL2 805 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
DDX56-201ENST00000258772 MAATS1Q7Z4T9 603 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 DDX42Q86XP3 938 aaKnown RBP eCLIP16.59■□□□□ 0.25
DDX56-201ENST00000258772 PROCA1Q8NCQ7 364 aaPredicted RBP16.59■□□□□ 0.25
DDX56-201ENST00000258772 HES6Q96HZ4 224 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 STK33Q9BYT3 514 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 PARVGQ9HBI0 331 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 HMGB1P1B2RPK0 211 aaPredicted RBP16.59■□□□□ 0.25
DDX56-201ENST00000258772 PSMD10O75832 226 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 ITGA4P13612 1032 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 SPICE1Q8N0Z3 855 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 MKNK1Q9BUB5 465 aa16.59■□□□□ 0.25
DDX56-201ENST00000258772 F8VZ95 297 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 NDUFAB1O14561 156 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 ZEB2O60315 1214 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 HSD17B3P37058 310 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 GUCY1A3Q02108 690 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 PPP2R5CQ13362 524 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 RRP1BQ14684 758 aaKnown RBP16.58■□□□□ 0.25
DDX56-201ENST00000258772 COG2Q14746 738 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 LRCH2Q5VUJ6 765 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 LRIG3Q6UXM1 1119 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 ZNF720Q7Z2F6 126 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 KSR1Q8IVT5 923 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 LRRC45Q96CN5 670 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 FIZ1Q96SL8 496 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 TMBIM4Q9HC24 238 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 SERPINA10Q9UK55 444 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 DNAJC12Q9UKB3 198 aa16.58■□□□□ 0.25
DDX56-201ENST00000258772 EP400Q96L91 3159 aa16.58■□□□□ 0.24
DDX56-201ENST00000258772 MYH11P35749 1972 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 215.2 ms