RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A DFG5Q05031 458 aa14.44□□□□□ -0.1
TRN1tP(UGG)A ARV1Q06541 321 aa14.44□□□□□ -0.1
TRN1tP(UGG)A YOR214CQ12282 236 aa14.44□□□□□ -0.1
TRN1tP(UGG)A YLR126CQ12288 251 aa14.44□□□□□ -0.1
TRN1tP(UGG)A RHO1P06780 209 aaKnown RBP14.43□□□□□ -0.1
TRN1tP(UGG)A SAC1P32368 623 aaKnown RBP14.43□□□□□ -0.1
TRN1tP(UGG)A MDV1P47025 714 aa14.43□□□□□ -0.1
TRN1tP(UGG)A SEH1P53011 349 aaKnown RBP14.43□□□□□ -0.1
TRN1tP(UGG)A PRM8P53174 237 aa14.43□□□□□ -0.1
TRN1tP(UGG)A YLR460CP54007 376 aa14.43□□□□□ -0.1
TRN1tP(UGG)A HSP42Q12329 375 aa14.43□□□□□ -0.1
TRN1tP(UGG)A AI1P03875 834 aa14.42□□□□□ -0.1
TRN1tP(UGG)A SIR3P06701 978 aa14.42□□□□□ -0.1
TRN1tP(UGG)A KGD1P20967 1014 aaKnown RBP14.42□□□□□ -0.1
TRN1tP(UGG)A MRPL6P32904 214 aa14.42□□□□□ -0.1
TRN1tP(UGG)A YBR139WP38109 508 aa14.42□□□□□ -0.1
TRN1tP(UGG)A YRB2P40517 327 aa14.42□□□□□ -0.1
TRN1tP(UGG)A CIN1P40987 1014 aa14.42□□□□□ -0.1
TRN1tP(UGG)A PBN1P25580 416 aa14.41□□□□□ -0.1
TRN1tP(UGG)A PTP2P29461 750 aa14.41□□□□□ -0.1
TRN1tP(UGG)A EMP70P32802 667 aa14.41□□□□□ -0.1
TRN1tP(UGG)A PDR3P33200 976 aa14.41□□□□□ -0.1
TRN1tP(UGG)A YHR219WP38900 624 aa14.41□□□□□ -0.1
TRN1tP(UGG)A TAT2P38967 592 aa14.41□□□□□ -0.1
TRN1tP(UGG)A PAC1P39946 494 aaKnown RBP14.41□□□□□ -0.1
TRN1tP(UGG)A COG3P40094 801 aa14.41□□□□□ -0.1
TRN1tP(UGG)A LEM3P42838 414 aa14.41□□□□□ -0.1
TRN1tP(UGG)A BNA3P47039 444 aaKnown RBP14.41□□□□□ -0.1
TRN1tP(UGG)A IKS1P47042 667 aa14.41□□□□□ -0.1
TRN1tP(UGG)A MPC1P53157 130 aaKnown RBP14.41□□□□□ -0.1
TRN1tP(UGG)A MEP3P53390 489 aa14.41□□□□□ -0.1
TRN1tP(UGG)A NCE101Q02820 53 aa14.41□□□□□ -0.1
TRN1tP(UGG)A YDL211CQ12121 372 aa14.41□□□□□ -0.1
TRN1tP(UGG)A PAR32Q12515 295 aaKnown RBP14.41□□□□□ -0.1
TRN1tP(UGG)A YHR097CP38809 366 aaKnown RBP14.4□□□□□ -0.1
TRN1tP(UGG)A SPO73P40031 143 aa14.4□□□□□ -0.1
TRN1tP(UGG)A OCA1P50946 238 aaPredicted RBP14.4□□□□□ -0.1
TRN1tP(UGG)A YOR376WQ08900 122 aa14.4□□□□□ -0.1
TRN1tP(UGG)A YOR389WQ08912 624 aa14.4□□□□□ -0.1
TRN1tP(UGG)A YPL278CQ08990 100 aa14.4□□□□□ -0.1
TRN1tP(UGG)A NFI1Q12216 726 aa14.4□□□□□ -0.1
TRN1tP(UGG)A YOL163WP0CF20 169 aa14.39□□□□□ -0.11
TRN1tP(UGG)A KSS1P14681 368 aa14.39□□□□□ -0.11
TRN1tP(UGG)A ALG3P38179 458 aa14.39□□□□□ -0.11
TRN1tP(UGG)A SHR5P41912 237 aa14.39□□□□□ -0.11
TRN1tP(UGG)A IMD4P50094 524 aaKnown RBP14.39□□□□□ -0.11
TRN1tP(UGG)A DAM1P53267 343 aa14.39□□□□□ -0.11
TRN1tP(UGG)A YGR168CP53293 376 aa14.39□□□□□ -0.11
TRN1tP(UGG)A SEI1Q06058 285 aa14.39□□□□□ -0.11
TRN1tP(UGG)A HAA1Q12753 694 aaKnown RBP14.39□□□□□ -0.11
TRN1tP(UGG)A DAT1P13483 248 aaKnown RBP14.38□□□□□ -0.11
TRN1tP(UGG)A HBS1P32769 611 aaKnown RBP14.38□□□□□ -0.11
TRN1tP(UGG)A YNL195CP40168 261 aa14.38□□□□□ -0.11
TRN1tP(UGG)A NUP53Q03790 475 aa14.38□□□□□ -0.11
TRN1tP(UGG)A URC2Q04411 772 aa14.38□□□□□ -0.11
TRN1tP(UGG)A ENT2Q05785 613 aa14.38□□□□□ -0.11
TRN1tP(UGG)A RIB3Q99258 208 aa14.38□□□□□ -0.11
TRN1tP(UGG)A CPR3P25719 182 aa14.37□□□□□ -0.11
TRN1tP(UGG)A NAM9P27929 486 aa14.37□□□□□ -0.11
TRN1tP(UGG)A CYS4P32582 507 aaKnown RBP14.37□□□□□ -0.11
TRN1tP(UGG)A SEC61P32915 480 aa14.37□□□□□ -0.11
TRN1tP(UGG)A YIL067CP40514 678 aa14.37□□□□□ -0.11
TRN1tP(UGG)A SKI7Q08491 747 aaPredicted RBP14.37□□□□□ -0.11
TRN1tP(UGG)A NPC2Q12408 173 aa14.37□□□□□ -0.11
TRN1tP(UGG)A RPC40P07703 335 aaKnown RBP14.36□□□□□ -0.11
TRN1tP(UGG)A RHB1P25378 209 aa14.36□□□□□ -0.11
TRN1tP(UGG)A ITR2P30606 609 aa14.36□□□□□ -0.11
TRN1tP(UGG)A ASF2P32448 525 aaPredicted RBP14.36□□□□□ -0.11
TRN1tP(UGG)A YPT7P32939 208 aa14.36□□□□□ -0.11
TRN1tP(UGG)A AHP1P38013 176 aaKnown RBP14.36□□□□□ -0.11
TRN1tP(UGG)A PRE6P40303 254 aaKnown RBP14.36□□□□□ -0.11
TRN1tP(UGG)A GCN20P43535 752 aaKnown RBP14.36□□□□□ -0.11
TRN1tP(UGG)A IRC6P43615 237 aa14.36□□□□□ -0.11
TRN1tP(UGG)A YMR099CQ03161 297 aaKnown RBP14.36□□□□□ -0.11
TRN1tP(UGG)A PAL1Q05518 499 aaKnown RBP14.36□□□□□ -0.11
TRN1tP(UGG)A CYK3Q07533 885 aa14.36□□□□□ -0.11
TRN1tP(UGG)A YOS9Q99220 542 aa14.36□□□□□ -0.11
TRN1tP(UGG)A FLP1P03870 423 aa14.35□□□□□ -0.11
TRN1tP(UGG)A ARF1P11076 181 aaKnown RBP14.35□□□□□ -0.11
TRN1tP(UGG)A NCP1P16603 691 aaKnown RBP14.35□□□□□ -0.11
TRN1tP(UGG)A FAR1P21268 830 aa14.35□□□□□ -0.11
TRN1tP(UGG)A RRP7P25368 297 aaPredicted RBP14.35□□□□□ -0.11
TRN1tP(UGG)A HIR2P32480 875 aa14.35□□□□□ -0.11
TRN1tP(UGG)A ARC19P33204 171 aaKnown RBP14.35□□□□□ -0.11
TRN1tP(UGG)A SEF1P34228 1148 aa14.35□□□□□ -0.11
TRN1tP(UGG)A SNU114P36048 1008 aaKnown RBP14.35□□□□□ -0.11
TRN1tP(UGG)A CTF8P38877 133 aa14.35□□□□□ -0.11
TRN1tP(UGG)A GVP36P40531 326 aaKnown RBP14.35□□□□□ -0.11
TRN1tP(UGG)A RSN1Q03516 953 aa14.35□□□□□ -0.11
TRN1tP(UGG)A BRX1Q08235 291 aaKnown RBP14.35□□□□□ -0.11
TRN1tP(UGG)A RAX1Q08760 435 aa14.35□□□□□ -0.11
TRN1tP(UGG)A TAD3Q9URQ3 322 aa14.35□□□□□ -0.11
TRN1tP(UGG)A ECM8P38246 354 aa14.34□□□□□ -0.11
TRN1tP(UGG)A SIC1P38634 284 aa14.34□□□□□ -0.11
TRN1tP(UGG)A AST2P39945 430 aaKnown RBP14.34□□□□□ -0.11
TRN1tP(UGG)A LSG1P53145 640 aaKnown RBP14.34□□□□□ -0.11
TRN1tP(UGG)A YKR011CQ02209 353 aa14.34□□□□□ -0.11
TRN1tP(UGG)A FMP40Q08968 688 aaPredicted RBP14.34□□□□□ -0.11
TRN1tP(UGG)A DBP10Q12389 995 aaKnown RBP14.34□□□□□ -0.11
TRN1tP(UGG)A HSP150P32478 413 aa14.33□□□□□ -0.12
Retrieved 100 of 5,963 RNA–protein pairs in 41.8 ms