RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeast

Gene TRM112, Length 408 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM112	YNR046W	BOR1	P53838	576 aa		3.22	□□□□□ -1.89
TRM112	YNR046W	PRO2	P54885	456 aa	Known RBP	3.22	□□□□□ -1.89
TRM112	YNR046W	YMR010W	Q03687	405 aa		3.22	□□□□□ -1.89
TRM112	YNR046W	HRI1	Q05905	244 aa	Known RBP	3.22	□□□□□ -1.89
TRM112	YNR046W	YGK3	Q12222	375 aa	Predicted RBP	3.22	□□□□□ -1.89
TRM112	YNR046W	APC2	Q12440	853 aa		3.22	□□□□□ -1.89
TRM112	YNR046W	CDC37	P06101	506 aa	Known RBP	3.21	□□□□□ -1.9
TRM112	YNR046W	YLL053C	P0CD98	152 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	CBS2	P14905	389 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	CKI1	P20485	582 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	DPH5	P32469	300 aa	Predicted RBP	3.21	□□□□□ -1.9
TRM112	YNR046W	SSE1	P32589	693 aa	Known RBP	3.21	□□□□□ -1.9
TRM112	YNR046W	VAM7	P32912	316 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	YBR139W	P38109	508 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	YHR182W	P38870	785 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	PRP39	P39682	629 aa	Known RBP	3.21	□□□□□ -1.9
TRM112	YNR046W	SEC27	P41811	889 aa	Known RBP	3.21	□□□□□ -1.9
TRM112	YNR046W	SCS3	P53012	380 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	COS1	P53822	381 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	IMP4	P53941	290 aa	Known RBP	3.21	□□□□□ -1.9
TRM112	YNR046W	VPS20	Q04272	221 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	PCL9	Q12477	304 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	AIM45	Q12480	344 aa	Known RBP	3.21	□□□□□ -1.9
TRM112	YNR046W	YCR024C-B	Q3E7Z8	88 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	RGS2	Q99188	309 aa		3.21	□□□□□ -1.9
TRM112	YNR046W	MSI1	P13712	422 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	PET123	P17558	318 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	RPB5	P20434	215 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	PET18	P25362	215 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	ECM8	P38246	354 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	SSO2	P39926	295 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	PCL7	P40186	285 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	YMR134W	P40207	237 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	REE1	P40893	198 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	LCB3	P47013	409 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	YGL242C	P53066	181 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	ARP5	P53946	755 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	SMP3	Q04174	516 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	RTN1	Q04947	295 aa	Known RBP	3.2	□□□□□ -1.9
TRM112	YNR046W	APC5	Q08683	685 aa		3.2	□□□□□ -1.9
TRM112	YNR046W	CBP2	P03874	630 aa	Predicted RBP	3.19	□□□□□ -1.9
TRM112	YNR046W	RPS16A	P0CX51	143 aa	Known RBP	3.19	□□□□□ -1.9
TRM112	YNR046W	RPS16B	P0CX52	143 aa	Known RBP	3.19	□□□□□ -1.9
TRM112	YNR046W	GCD2	P12754	651 aa	Predicted RBP	3.19	□□□□□ -1.9
TRM112	YNR046W	GAL3	P13045	520 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	END3	P39013	349 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	RBG1	P39729	369 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	PAN6	P40459	309 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	YGR210C	P42942	411 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	GPI8	P49018	411 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	MST27	P53176	234 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	CLD1	P53264	445 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	TDA1	Q03533	586 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	YPR091C	Q06833	770 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	YDL114W	Q07530	308 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	IRC25	Q07951	179 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	FCY22	Q12119	530 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	JID1	Q12350	301 aa		3.19	□□□□□ -1.9
TRM112	YNR046W	RPS8A	P0CX39	200 aa	Known RBP	3.18	□□□□□ -1.9
TRM112	YNR046W	RPS8B	P0CX40	200 aa	Known RBP	3.18	□□□□□ -1.9
TRM112	YNR046W	ARF2	P19146	181 aa	Known RBP	3.18	□□□□□ -1.9
TRM112	YNR046W	MXR2	P25566	168 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	DAL80	P26343	269 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	NAM9	P27929	486 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	RTC2	P38279	296 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	CCT4	P39078	528 aa	Known RBP	3.18	□□□□□ -1.9
TRM112	YNR046W	YPI1	P43587	155 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	YFR057W	P43625	151 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	ABM1	P47146	123 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	CWC22	P53333	577 aa	Known RBP	3.18	□□□□□ -1.9
TRM112	YNR046W	NAT4	Q04751	285 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	YLR297W	Q05899	129 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	YTH1	Q06102	208 aa	Predicted RBP	3.18	□□□□□ -1.9
TRM112	YNR046W	RIF2	Q06208	395 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	YDR262W	Q12331	272 aa		3.18	□□□□□ -1.9
TRM112	YNR046W	VPS63	O13549	108 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	PRR1	P28708	518 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	EBP2	P36049	427 aa	Known RBP	3.17	□□□□□ -1.9
TRM112	YNR046W	PCH2	P38126	564 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	YNL208W	P40159	199 aa	Known RBP	3.17	□□□□□ -1.9
TRM112	YNR046W	YFR018C	P43599	363 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	KEG1	P43614	200 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	AIP1	P46680	615 aa	Known RBP	3.17	□□□□□ -1.9
TRM112	YNR046W	YJR085C	P47131	105 aa	Known RBP	3.17	□□□□□ -1.9
TRM112	YNR046W	TRF5	P48561	642 aa	Known RBP	3.17	□□□□□ -1.9
TRM112	YNR046W	LST7	P53237	242 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	ABZ2	Q03266	374 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	YLH47	Q06493	454 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	CMS1	Q07897	291 aa	Known RBP	3.17	□□□□□ -1.9
TRM112	YNR046W	GAT3	Q07928	141 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	HMS1	Q12398	434 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	SPO24	Q3E752	67 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	YIL002W-A	Q3E7Z5	69 aa		3.17	□□□□□ -1.9
TRM112	YNR046W	CIN8	P27895	1000 aa		3.16	□□□□□ -1.9
TRM112	YNR046W	CSE2	P33308	149 aa		3.16	□□□□□ -1.9
TRM112	YNR046W	SPO23	P33757	523 aa		3.16	□□□□□ -1.9
TRM112	YNR046W	MRPS5	P33759	307 aa		3.16	□□□□□ -1.9
TRM112	YNR046W	YKR015C	P36111	568 aa		3.16	□□□□□ -1.9
TRM112	YNR046W	RFS1	P38234	210 aa	Known RBP	3.16	□□□□□ -1.9
TRM112	YNR046W	PEX32	P38292	413 aa		3.16	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms