RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W FMP16Q12497 93 aa3.04□□□□□ -1.92
UBP8YMR223W LAG2Q92325 660 aa3.04□□□□□ -1.92
UBP8YMR223W ADH2P00331 348 aaKnown RBP3.03□□□□□ -1.92
UBP8YMR223W PEP4P07267 405 aaKnown RBP3.03□□□□□ -1.92
UBP8YMR223W SAM1P10659 382 aaKnown RBP3.03□□□□□ -1.92
UBP8YMR223W ICL1P28240 557 aaPredicted RBP3.03□□□□□ -1.92
UBP8YMR223W DEP1P31385 405 aa3.03□□□□□ -1.92
UBP8YMR223W DUG2P38149 878 aa3.03□□□□□ -1.92
UBP8YMR223W ZTA1P38230 334 aaKnown RBP3.03□□□□□ -1.92
UBP8YMR223W MTW1P39731 289 aa3.03□□□□□ -1.92
UBP8YMR223W BNA6P43619 295 aa3.03□□□□□ -1.92
UBP8YMR223W HAM1P47119 197 aaKnown RBP3.03□□□□□ -1.92
UBP8YMR223W YGL114WP53134 725 aa3.03□□□□□ -1.92
UBP8YMR223W SKO1Q02100 647 aa3.03□□□□□ -1.92
UBP8YMR223W SRL4Q03085 281 aa3.03□□□□□ -1.92
UBP8YMR223W CAB5Q03941 241 aa3.03□□□□□ -1.92
UBP8YMR223W CTS2Q06350 511 aa3.03□□□□□ -1.92
UBP8YMR223W MRPL35Q06678 367 aa3.03□□□□□ -1.92
UBP8YMR223W AEP3Q12089 606 aa3.03□□□□□ -1.92
UBP8YMR223W CMC2Q3E7A4 109 aa3.03□□□□□ -1.92
UBP8YMR223W BRR1Q99177 341 aaPredicted RBP3.03□□□□□ -1.92
UBP8YMR223W LEU4P06208 619 aaKnown RBP3.02□□□□□ -1.93
UBP8YMR223W MATALPHA1P0CY06 175 aa3.02□□□□□ -1.93
UBP8YMR223W HMLALPHA1P0CY07 175 aa3.02□□□□□ -1.93
UBP8YMR223W ART10P18634 518 aaKnown RBP3.02□□□□□ -1.93
UBP8YMR223W CPR4P25334 318 aa3.02□□□□□ -1.93
UBP8YMR223W ELO2P25358 347 aa3.02□□□□□ -1.93
UBP8YMR223W YCR016WP25617 290 aaKnown RBP3.02□□□□□ -1.93
UBP8YMR223W CWP1P28319 239 aa3.02□□□□□ -1.93
UBP8YMR223W RAD23P32628 398 aaKnown RBP3.02□□□□□ -1.93
UBP8YMR223W GDH2P33327 1092 aaKnown RBP3.02□□□□□ -1.93
UBP8YMR223W SHP1P34223 423 aa3.02□□□□□ -1.93
UBP8YMR223W YJL118WP47022 219 aa3.02□□□□□ -1.93
UBP8YMR223W YHC3P47040 408 aa3.02□□□□□ -1.93
UBP8YMR223W IBD2P53892 351 aa3.02□□□□□ -1.93
UBP8YMR223W KTR5P53966 522 aaPredicted RBP3.02□□□□□ -1.93
UBP8YMR223W SLT2Q00772 484 aa3.02□□□□□ -1.93
UBP8YMR223W STD1Q02794 444 aa3.02□□□□□ -1.93
UBP8YMR223W GIM5Q04493 163 aa3.02□□□□□ -1.93
UBP8YMR223W CMS1Q07897 291 aaKnown RBP3.02□□□□□ -1.93
UBP8YMR223W RKM1Q08961 583 aaPredicted RBP3.02□□□□□ -1.93
UBP8YMR223W VIK1Q12045 647 aa3.02□□□□□ -1.93
UBP8YMR223W GET4Q12125 312 aa3.02□□□□□ -1.93
UBP8YMR223W CHS1P08004 1131 aa3.02□□□□□ -1.93
UBP8YMR223W POL30P15873 258 aaKnown RBP3.02□□□□□ -1.93
UBP8YMR223W RCY1P39531 840 aa3.02□□□□□ -1.93
UBP8YMR223W VHS2P40463 436 aa3.02□□□□□ -1.93
UBP8YMR223W FMC1P40491 155 aa3.02□□□□□ -1.93
UBP8YMR223W COS5P47187 383 aa3.02□□□□□ -1.93
UBP8YMR223W MIG2P53035 382 aa3.02□□□□□ -1.93
UBP8YMR223W OCA2P53949 197 aa3.02□□□□□ -1.93
UBP8YMR223W YMR130WQ04223 302 aa3.02□□□□□ -1.93
UBP8YMR223W RRG8Q06109 277 aa3.02□□□□□ -1.93
UBP8YMR223W GPN3Q06543 272 aa3.02□□□□□ -1.93
UBP8YMR223W COS7Q07788 383 aa3.02□□□□□ -1.93
UBP8YMR223W GRE1Q08969 168 aa3.02□□□□□ -1.93
UBP8YMR223W PKH2Q12236 1081 aaKnown RBP3.02□□□□□ -1.93
UBP8YMR223W ATG31Q12421 196 aa3.02□□□□□ -1.93
UBP8YMR223W YDL012CQ12489 107 aa3.02□□□□□ -1.93
UBP8YMR223W COX3P00420 269 aa3.01□□□□□ -1.93
UBP8YMR223W MSF1P08425 469 aa3.01□□□□□ -1.93
UBP8YMR223W DAL2P25335 343 aa3.01□□□□□ -1.93
UBP8YMR223W CYM1P32898 989 aa3.01□□□□□ -1.93
UBP8YMR223W MRPL10P36520 322 aa3.01□□□□□ -1.93
UBP8YMR223W MAL32P38158 584 aa3.01□□□□□ -1.93
UBP8YMR223W FAU1P40099 211 aa3.01□□□□□ -1.93
UBP8YMR223W TOS3P43637 560 aa3.01□□□□□ -1.93
UBP8YMR223W BRO1P48582 844 aa3.01□□□□□ -1.93
UBP8YMR223W MAL12P53341 584 aa3.01□□□□□ -1.93
UBP8YMR223W ENT5Q03769 411 aaKnown RBP3.01□□□□□ -1.93
UBP8YMR223W RRP17Q04031 235 aaPredicted RBP3.01□□□□□ -1.93
UBP8YMR223W MYO5Q04439 1219 aaKnown RBP3.01□□□□□ -1.93
UBP8YMR223W COX20Q04935 205 aa3.01□□□□□ -1.93
UBP8YMR223W RRP45Q05636 305 aaKnown RBP3.01□□□□□ -1.93
UBP8YMR223W DCS1Q06151 350 aa3.01□□□□□ -1.93
UBP8YMR223W GMC2Q06201 188 aa3.01□□□□□ -1.93
UBP8YMR223W ABP140Q08641 628 aaKnown RBP3.01□□□□□ -1.93
UBP8YMR223W YOR029WQ12243 111 aa3.01□□□□□ -1.93
UBP8YMR223W YLR108CQ12259 485 aa3.01□□□□□ -1.93
UBP8YMR223W GLE1Q12315 538 aa3.01□□□□□ -1.93
UBP8YMR223W PAA1Q12447 191 aaKnown RBP3.01□□□□□ -1.93
UBP8YMR223W DCP1Q12517 231 aaPredicted RBP3.01□□□□□ -1.93
UBP8YMR223W RAD9P14737 1309 aa3□□□□□ -1.93
UBP8YMR223W TDH2P00358 332 aaKnown RBP3□□□□□ -1.93
UBP8YMR223W TDH3P00359 332 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
UBP8YMR223W ARG4P04076 463 aaPredicted RBP3□□□□□ -1.93
UBP8YMR223W PDE2P06776 526 aa3□□□□□ -1.93
UBP8YMR223W CDC21P06785 304 aa3□□□□□ -1.93
UBP8YMR223W TCP1P12612 559 aaKnown RBP3□□□□□ -1.93
UBP8YMR223W ZIP1P31111 875 aa3□□□□□ -1.93
UBP8YMR223W YPS1P32329 569 aa3□□□□□ -1.93
UBP8YMR223W RSM22P36056 628 aa3□□□□□ -1.93
UBP8YMR223W NAT2P37293 288 aa3□□□□□ -1.93
UBP8YMR223W KAP104P38217 918 aaKnown RBP3□□□□□ -1.93
UBP8YMR223W IML3P38265 245 aa3□□□□□ -1.93
UBP8YMR223W SBE22P38814 852 aa3□□□□□ -1.93
UBP8YMR223W FMP33P46998 180 aa3□□□□□ -1.93
UBP8YMR223W CAF130P53280 1122 aaPredicted RBP3□□□□□ -1.93
UBP8YMR223W NOP13P53883 403 aaKnown RBP RIP-Chip data3□□□□□ -1.93not detected
UBP8YMR223W NNT1Q05874 261 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms