RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YPL080CQ02826 108 aa3.11□□□□□ -1.91
YIR040CYIR040C SNU56Q03782 492 aaKnown RBP3.11□□□□□ -1.91
YIR040CYIR040C YDR249CQ03787 373 aa3.11□□□□□ -1.91
YIR040CYIR040C ARX1Q03862 593 aaKnown RBP3.11□□□□□ -1.91
YIR040CYIR040C PLM2Q04383 521 aa3.11□□□□□ -1.91
YIR040CYIR040C SOV1Q04748 898 aa3.11□□□□□ -1.91
YIR040CYIR040C YMR253CQ04835 414 aa3.11□□□□□ -1.91
YIR040CYIR040C CTS2Q06350 511 aa3.11□□□□□ -1.91
YIR040CYIR040C IWR1Q07532 353 aaPredicted RBP3.11□□□□□ -1.91
YIR040CYIR040C FMP45Q07651 309 aa3.11□□□□□ -1.91
YIR040CYIR040C SHS1Q07657 551 aa3.11□□□□□ -1.91
YIR040CYIR040C RAX1Q08760 435 aa3.11□□□□□ -1.91
YIR040CYIR040C RDR1Q08904 546 aa3.11□□□□□ -1.91
YIR040CYIR040C USV1Q12132 391 aa3.11□□□□□ -1.91
YIR040CYIR040C RRP42Q12277 265 aaPredicted RBP3.11□□□□□ -1.91
YIR040CYIR040C OCA6Q12454 224 aa3.11□□□□□ -1.91
YIR040CYIR040C YBR126W-AQ8TGU7 68 aa3.11□□□□□ -1.91
YIR040CYIR040C AFI1Q99222 893 aa3.11□□□□□ -1.91
YIR040CYIR040C SIR4P11978 1358 aa3.11□□□□□ -1.91
YIR040CYIR040C MMS22Q06164 1454 aa3.1□□□□□ -1.91
YIR040CYIR040C TDH2P00358 332 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C TDH3P00359 332 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
YIR040CYIR040C HTB1P02293 131 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C HTB2P02294 131 aa3.1□□□□□ -1.91
YIR040CYIR040C RPP0P05317 312 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C SCH9P11792 824 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C GUK1P15454 187 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C CDC43P18898 376 aa3.1□□□□□ -1.91
YIR040CYIR040C RPS1BP23248 255 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C HXT2P23585 541 aa3.1□□□□□ -1.91
YIR040CYIR040C NDC1P32500 655 aa3.1□□□□□ -1.91
YIR040CYIR040C SIP1P32578 815 aa3.1□□□□□ -1.91
YIR040CYIR040C SPR1P32603 445 aa3.1□□□□□ -1.91
YIR040CYIR040C EMP70P32802 667 aa3.1□□□□□ -1.91
YIR040CYIR040C YBL055CP34220 418 aaPredicted RBP3.1□□□□□ -1.91
YIR040CYIR040C SEF1P34228 1148 aa3.1□□□□□ -1.91
YIR040CYIR040C CSG2P35206 410 aa3.1□□□□□ -1.91
YIR040CYIR040C YPT53P36019 220 aa3.1□□□□□ -1.91
YIR040CYIR040C OAF3P36023 863 aa3.1□□□□□ -1.91
YIR040CYIR040C MAL33P38157 468 aa3.1□□□□□ -1.91
YIR040CYIR040C RRT2P38332 387 aa3.1□□□□□ -1.91
YIR040CYIR040C POP4P38336 279 aa3.1□□□□□ -1.91
YIR040CYIR040C KSP1P38691 1029 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C GRE3P38715 327 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
YIR040CYIR040C SMF1P38925 575 aa3.1□□□□□ -1.91
YIR040CYIR040C ERV46P39727 415 aa3.1□□□□□ -1.91
YIR040CYIR040C YMR147WP40218 223 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C PFK26P40433 827 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C DOT5P40553 215 aa3.1□□□□□ -1.91
YIR040CYIR040C CIN1P40987 1014 aa3.1□□□□□ -1.91
YIR040CYIR040C HXT14P42833 540 aa3.1□□□□□ -1.91
YIR040CYIR040C CAK1P43568 368 aaPredicted RBP3.1□□□□□ -1.91
YIR040CYIR040C FAR7P43592 221 aa3.1□□□□□ -1.91
YIR040CYIR040C GUF1P46943 645 aa3.1□□□□□ -1.91
YIR040CYIR040C PHO86P46956 311 aa3.1□□□□□ -1.91
YIR040CYIR040C YJR030CP47101 745 aa3.1□□□□□ -1.91
YIR040CYIR040C MOG1P47123 218 aa3.1□□□□□ -1.91
YIR040CYIR040C SEH1P53011 349 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C BUD17P53727 317 aa3.1□□□□□ -1.91
YIR040CYIR040C MTQ1P53944 314 aa3.1□□□□□ -1.91
YIR040CYIR040C ALG11P53954 548 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C SKI8Q02793 397 aaPredicted RBP3.1□□□□□ -1.91
YIR040CYIR040C NGL3Q03210 505 aa3.1□□□□□ -1.91
YIR040CYIR040C YMR279CQ03263 540 aa3.1□□□□□ -1.91
YIR040CYIR040C RCR2Q03446 210 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C SDH7Q04401 133 aa3.1□□□□□ -1.91
YIR040CYIR040C YLR407WQ06070 228 aa3.1□□□□□ -1.91
YIR040CYIR040C YFH1Q07540 174 aa3.1□□□□□ -1.91
YIR040CYIR040C YLR036CQ07986 203 aa3.1□□□□□ -1.91
YIR040CYIR040C HRD1Q08109 551 aa3.1□□□□□ -1.91
YIR040CYIR040C CRT10Q08226 957 aa3.1□□□□□ -1.91
YIR040CYIR040C BSC6Q08280 497 aa3.1□□□□□ -1.91
YIR040CYIR040C YNG1Q08465 219 aa3.1□□□□□ -1.91
YIR040CYIR040C FRE3Q08905 711 aa3.1□□□□□ -1.91
YIR040CYIR040C CWC2Q12046 339 aaPredicted RBP3.1□□□□□ -1.91
YIR040CYIR040C YPR027CQ12079 277 aa3.1□□□□□ -1.91
YIR040CYIR040C PUF2Q12221 1075 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
YIR040CYIR040C TPT1Q12272 230 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C PSF1Q12488 208 aa3.1□□□□□ -1.91
YIR040CYIR040C RPS21BQ3E754 87 aaKnown RBP3.1□□□□□ -1.91
YIR040CYIR040C PSK1P31374 1356 aa3.1□□□□□ -1.91
YIR040CYIR040C GEA1P47102 1408 aaPredicted RBP3.1□□□□□ -1.91
YIR040CYIR040C HAP2P06774 265 aa3.09□□□□□ -1.91
YIR040CYIR040C CBP1P07252 654 aa3.09□□□□□ -1.91
YIR040CYIR040C YBR121C-AP0C5L4 52 aa3.09□□□□□ -1.91
YIR040CYIR040C ARO3P14843 370 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C HEM15P16622 393 aa3.09□□□□□ -1.91
YIR040CYIR040C PET9P18239 318 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C ART10P18634 518 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C RPO26P20435 155 aa3.09□□□□□ -1.91
YIR040CYIR040C IME1P21190 360 aa3.09□□□□□ -1.91
YIR040CYIR040C IDP1P21954 428 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C ARG1P22768 420 aa3.09□□□□□ -1.91
YIR040CYIR040C YCL068CP25593 260 aa3.09□□□□□ -1.91
YIR040CYIR040C FEN2P25621 512 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C ADE1P27616 306 aa3.09□□□□□ -1.91
YIR040CYIR040C AFG1P32317 509 aa3.09□□□□□ -1.91
YIR040CYIR040C SPT14P32363 452 aa3.09□□□□□ -1.91
YIR040CYIR040C SPS19P32573 292 aaKnown RBP3.09□□□□□ -1.91
YIR040CYIR040C RML2P32611 393 aa3.09□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 50.7 ms