RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W NRP1P32770 719 aaKnown RBP RIP-Chip data2.96□□□□□ -1.94not detected
SEC28YIL076W FMT1P32785 401 aa2.96□□□□□ -1.94
SEC28YIL076W QDR3P38227 689 aa2.96□□□□□ -1.94
SEC28YIL076W WSS1P38838 269 aa2.96□□□□□ -1.94
SEC28YIL076W HEM14P40012 539 aa2.96□□□□□ -1.94
SEC28YIL076W IGO1P53897 168 aa2.96□□□□□ -1.94
SEC28YIL076W PRP3Q03338 469 aaPredicted RBP2.96□□□□□ -1.94
SEC28YIL076W ECM7Q06200 448 aa2.96□□□□□ -1.94
SEC28YIL076W ASA1Q06822 443 aa2.96□□□□□ -1.94
SEC28YIL076W NSE1Q07913 336 aa2.96□□□□□ -1.94
SEC28YIL076W TPI1P00942 248 aaKnown RBP2.95□□□□□ -1.94
SEC28YIL076W RPL12AP0CX53 165 aaKnown RBP2.95□□□□□ -1.94
SEC28YIL076W RPL12BP0CX54 165 aa2.95□□□□□ -1.94
SEC28YIL076W LSM12P38828 187 aaKnown RBP2.95□□□□□ -1.94
SEC28YIL076W PEX22P39718 180 aa2.95□□□□□ -1.94
SEC28YIL076W KEG1P43614 200 aa2.95□□□□□ -1.94
SEC28YIL076W ABM1P47146 123 aa2.95□□□□□ -1.94
SEC28YIL076W TRF5P48561 642 aaKnown RBP2.95□□□□□ -1.94
SEC28YIL076W ROG1P53118 685 aa2.95□□□□□ -1.94
SEC28YIL076W YGR111WP53265 400 aa2.95□□□□□ -1.94
SEC28YIL076W MSC3Q05812 728 aa2.95□□□□□ -1.94
SEC28YIL076W UAF30Q08747 228 aa2.95□□□□□ -1.94
SEC28YIL076W SLF1Q12034 447 aaKnown RBP2.95□□□□□ -1.94
SEC28YIL076W TIR4Q12218 487 aaPredicted RBP2.95□□□□□ -1.94
SEC28YIL076W ARF1P11076 181 aaKnown RBP2.94□□□□□ -1.94
SEC28YIL076W PHO91P27514 894 aa2.94□□□□□ -1.94
SEC28YIL076W PDC2P32896 925 aa2.94□□□□□ -1.94
SEC28YIL076W DOA1P36037 715 aa2.94□□□□□ -1.94
SEC28YIL076W SEH1P53011 349 aaKnown RBP2.94□□□□□ -1.94
SEC28YIL076W PRP38Q00723 242 aaPredicted RBP2.94□□□□□ -1.94
SEC28YIL076W SPC19Q03954 165 aa2.94□□□□□ -1.94
SEC28YIL076W YDR115WQ04598 105 aa2.94□□□□□ -1.94
SEC28YIL076W RPS19AP07280 144 aaKnown RBP2.93□□□□□ -1.94
SEC28YIL076W RPS19BP07281 144 aaPredicted RBP2.93□□□□□ -1.94
SEC28YIL076W MDH1P17505 334 aaKnown RBP RIP-Chip data2.93□□□□□ -1.94not detected
SEC28YIL076W CHA1P25379 360 aaKnown RBP2.93□□□□□ -1.94
SEC28YIL076W TPS2P31688 896 aaKnown RBP2.93□□□□□ -1.94
SEC28YIL076W TOA2P32774 122 aa2.93□□□□□ -1.94
SEC28YIL076W YSC83P32792 385 aa2.93□□□□□ -1.94
SEC28YIL076W VAC7P53950 1165 aa2.93□□□□□ -1.94
SEC28YIL076W URC2Q04411 772 aa2.93□□□□□ -1.94
SEC28YIL076W YLR177WQ06251 628 aa2.93□□□□□ -1.94
SEC28YIL076W YDR061WQ12298 539 aa2.93□□□□□ -1.94
SEC28YIL076W HMS1Q12398 434 aa2.93□□□□□ -1.94
SEC28YIL076W ISA2Q12425 185 aa2.93□□□□□ -1.94
SEC28YIL076W MEX67Q99257 599 aaKnown RBP2.93□□□□□ -1.94
SEC28YIL076W PDE2P06776 526 aa2.92□□□□□ -1.94
SEC28YIL076W RPS18AP0CX55 146 aaKnown RBP2.92□□□□□ -1.94
SEC28YIL076W RPS18BP0CX56 146 aaPredicted RBP2.92□□□□□ -1.94
SEC28YIL076W MAS2P11914 482 aa2.92□□□□□ -1.94
SEC28YIL076W DCI1Q08558 271 aa2.92□□□□□ -1.94
SEC28YIL076W YOR376WQ08900 122 aa2.92□□□□□ -1.94
SEC28YIL076W ASP3-2P0CX77 362 aa2.91□□□□□ -1.94
SEC28YIL076W ASP3-3P0CX78 362 aa2.91□□□□□ -1.94
SEC28YIL076W ASP3-4P0CX79 362 aa2.91□□□□□ -1.94
SEC28YIL076W ASP3-1P0CZ17 362 aa2.91□□□□□ -1.94
SEC28YIL076W DBF4P32325 704 aa2.91□□□□□ -1.94
SEC28YIL076W TOA1P32773 286 aa2.91□□□□□ -1.94
SEC28YIL076W FHL1P39521 936 aa2.91□□□□□ -1.94
SEC28YIL076W PAC11P40960 533 aa2.91□□□□□ -1.94
SEC28YIL076W YGR067CP53243 804 aa2.91□□□□□ -1.94
SEC28YIL076W SFM1Q12314 213 aa2.91□□□□□ -1.94
SEC28YIL076W HSL1P34244 1518 aa2.9□□□□□ -1.95
SEC28YIL076W ANP1P32629 500 aa2.9□□□□□ -1.95
SEC28YIL076W CIN2P46670 268 aa2.9□□□□□ -1.95
SEC28YIL076W SPT6P23615 1451 aaKnown RBP2.9□□□□□ -1.95
SEC28YIL076W MSP1P28737 362 aa2.89□□□□□ -1.95
SEC28YIL076W LTV1P34078 463 aa2.89□□□□□ -1.95
SEC28YIL076W SMP1P38128 452 aa2.89□□□□□ -1.95
SEC28YIL076W SEC27P41811 889 aaKnown RBP2.89□□□□□ -1.95
SEC28YIL076W VEL1P53058 206 aa2.89□□□□□ -1.95
SEC28YIL076W ERO1Q03103 563 aa2.89□□□□□ -1.95
SEC28YIL076W ECM5Q03214 1411 aa2.89□□□□□ -1.95
SEC28YIL076W VPS72Q03388 795 aa2.89□□□□□ -1.95
SEC28YIL076W YMR010WQ03687 405 aa2.89□□□□□ -1.95
SEC28YIL076W LDS2Q08218 356 aa2.89□□□□□ -1.95
SEC28YIL076W SRO7Q12038 1033 aa2.89□□□□□ -1.95
SEC28YIL076W PRY2P36110 329 aa2.88□□□□□ -1.95
SEC28YIL076W ECM34P38728 170 aa2.88□□□□□ -1.95
SEC28YIL076W FRT2P39734 528 aa2.88□□□□□ -1.95
SEC28YIL076W COQ5P49017 307 aa2.87□□□□□ -1.95
SEC28YIL076W RTT102P53330 157 aa2.87□□□□□ -1.95
SEC28YIL076W YDR541CQ03049 344 aa2.87□□□□□ -1.95
SEC28YIL076W YPR195CQ06594 109 aa2.87□□□□□ -1.95
SEC28YIL076W GPM3Q12326 303 aa2.87□□□□□ -1.95
SEC28YIL076W YOL085CQ99345 113 aa2.87□□□□□ -1.95
SEC28YIL076W SPA2P23201 1466 aaKnown RBP2.87□□□□□ -1.95
SEC28YIL076W RNA1P11745 407 aaKnown RBP2.86□□□□□ -1.95
SEC28YIL076W YBR241CP38142 488 aa2.86□□□□□ -1.95
SEC28YIL076W CTK3P46963 296 aaPredicted RBP2.86□□□□□ -1.95
SEC28YIL076W BIO3P50277 480 aa2.86□□□□□ -1.95
SEC28YIL076W MEH1Q02205 184 aa2.86□□□□□ -1.95
SEC28YIL076W FSH2Q05015 223 aa2.86□□□□□ -1.95
SEC28YIL076W NDL1Q06568 189 aa2.86□□□□□ -1.95
SEC28YIL076W ATP16Q12165 160 aa2.86□□□□□ -1.95
SEC28YIL076W HIF1Q12373 385 aa2.86□□□□□ -1.95
SEC28YIL076W UNG1P12887 359 aa2.85□□□□□ -1.95
SEC28YIL076W EPT1P22140 391 aa2.85□□□□□ -1.95
SEC28YIL076W RPL16AP26784 199 aaKnown RBP2.85□□□□□ -1.95
SEC28YIL076W LDS1P31379 325 aa2.85□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 38.8 ms