RNA–Protein interactions for RNA: YGR184C

UBR1, Transcript of E3 ubiquitin ligase (N-recognin), yeastyeast

Gene UBR1, Length 5,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBR1YGR184C NSA1P53136 463 aaPredicted RBP2.05□□□□□ -2.08
UBR1YGR184C NMA2P53204 395 aa2.05□□□□□ -2.08
UBR1YGR184C PAM18Q07914 168 aa2.05□□□□□ -2.08
UBR1YGR184C PAA1Q12447 191 aaKnown RBP2.05□□□□□ -2.08
UBR1YGR184C UBA3Q99344 299 aa2.05□□□□□ -2.08
UBR1YGR184C MHP1P43638 1398 aa2.05□□□□□ -2.08
UBR1YGR184C CHS1P08004 1131 aa2.05□□□□□ -2.08
UBR1YGR184C CHO1P08456 276 aa2.05□□□□□ -2.08
UBR1YGR184C FUN19P28003 413 aaPredicted RBP2.05□□□□□ -2.08
UBR1YGR184C PDR3P33200 976 aa2.05□□□□□ -2.08
UBR1YGR184C MCR1P36060 302 aaKnown RBP2.05□□□□□ -2.08
UBR1YGR184C YPK3P38070 525 aa2.05□□□□□ -2.08
UBR1YGR184C HIS2P38635 335 aa2.05□□□□□ -2.08
UBR1YGR184C YJR141WP47172 347 aaPredicted RBP2.05□□□□□ -2.08
UBR1YGR184C BIO4P53630 237 aa2.05□□□□□ -2.08
UBR1YGR184C ODC1Q03028 310 aa2.05□□□□□ -2.08
UBR1YGR184C YMR181CQ03231 154 aa2.05□□□□□ -2.08
UBR1YGR184C YLL007CQ07799 665 aa2.05□□□□□ -2.08
UBR1YGR184C LOT6Q07923 191 aa2.05□□□□□ -2.08
UBR1YGR184C YOL073CQ08232 322 aa2.05□□□□□ -2.08
UBR1YGR184C SNF8Q12483 233 aa2.05□□□□□ -2.08
UBR1YGR184C ZRC1P20107 442 aa2.05□□□□□ -2.08
UBR1YGR184C PBN1P25580 416 aa2.05□□□□□ -2.08
UBR1YGR184C RAD5P32849 1169 aaPredicted RBP2.05□□□□□ -2.08
UBR1YGR184C SSO1P32867 290 aa2.05□□□□□ -2.08
UBR1YGR184C PTK1P36002 662 aaPredicted RBP2.05□□□□□ -2.08
UBR1YGR184C ROT2P38138 954 aa2.05□□□□□ -2.08
UBR1YGR184C RBG1P39729 369 aa2.05□□□□□ -2.08
UBR1YGR184C PAC2P39937 518 aa2.05□□□□□ -2.08
UBR1YGR184C BNA6P43619 295 aa2.05□□□□□ -2.08
UBR1YGR184C RAD17P48581 401 aa2.05□□□□□ -2.08
UBR1YGR184C MIC26P50087 233 aa2.05□□□□□ -2.08
UBR1YGR184C MPS1P54199 764 aa2.05□□□□□ -2.08
UBR1YGR184C INP2Q03824 705 aa2.05□□□□□ -2.08
UBR1YGR184C YMR087WQ04299 284 aa2.05□□□□□ -2.08
UBR1YGR184C THI20Q08224 551 aa2.05□□□□□ -2.08
UBR1YGR184C PKH2Q12236 1081 aaKnown RBP2.05□□□□□ -2.08
UBR1YGR184C AIM45Q12480 344 aaKnown RBP2.05□□□□□ -2.08
UBR1YGR184C VPS15P22219 1454 aa2.05□□□□□ -2.08
UBR1YGR184C RTC1Q08281 1341 aa2.05□□□□□ -2.08
UBR1YGR184C UNG1P12887 359 aa2.05□□□□□ -2.08
UBR1YGR184C FUS3P16892 353 aaKnown RBP2.05□□□□□ -2.08
UBR1YGR184C COQ1P18900 473 aa2.05□□□□□ -2.08
UBR1YGR184C TPS2P31688 896 aaKnown RBP2.05□□□□□ -2.08
UBR1YGR184C YEF1P32622 495 aa2.05□□□□□ -2.08
UBR1YGR184C CBR1P38626 284 aaKnown RBP2.05□□□□□ -2.08
UBR1YGR184C SPP2Q02521 185 aa2.05□□□□□ -2.08
UBR1YGR184C RPS10AQ08745 105 aaPredicted RBP2.05□□□□□ -2.08
UBR1YGR184C PDR15Q04182 1529 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C RAD3P06839 778 aa2.04□□□□□ -2.08
UBR1YGR184C ATP1P07251 545 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C RPI1P23250 407 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C RPS5P26783 225 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C MRPS5P33759 307 aa2.04□□□□□ -2.08
UBR1YGR184C YHR045WP38775 560 aa2.04□□□□□ -2.08
UBR1YGR184C HAT2P39984 401 aa2.04□□□□□ -2.08
UBR1YGR184C ORM2Q06144 216 aa2.04□□□□□ -2.08
UBR1YGR184C YOP1Q12402 180 aa2.04□□□□□ -2.08
UBR1YGR184C TY1B-DR4Q07793 1604 aa2.04□□□□□ -2.08
UBR1YGR184C RPL27AP0C2H6 136 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C RPL27BP0C2H7 136 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C SNF3P10870 884 aa2.04□□□□□ -2.08
UBR1YGR184C YSC83P32792 385 aa2.04□□□□□ -2.08
UBR1YGR184C ECM15P35195 104 aa2.04□□□□□ -2.08
UBR1YGR184C IML3P38265 245 aa2.04□□□□□ -2.08
UBR1YGR184C AIM3P38266 947 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C SBE22P38814 852 aa2.04□□□□□ -2.08
UBR1YGR184C GEA1P47102 1408 aaPredicted RBP2.04□□□□□ -2.08
UBR1YGR184C TRP3P00937 484 aa2.04□□□□□ -2.08
UBR1YGR184C RPL18AP0CX49 186 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C RPL18BP0CX50 186 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C MRP1P10662 321 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C SEC62P21825 274 aa2.04□□□□□ -2.08
UBR1YGR184C BUB3P26449 341 aa2.04□□□□□ -2.08
UBR1YGR184C BUD2P33314 1104 aa2.04□□□□□ -2.08
UBR1YGR184C AGP3P43548 558 aa2.04□□□□□ -2.08
UBR1YGR184C PMT4P46971 762 aa2.04□□□□□ -2.08
UBR1YGR184C BET5Q03630 159 aa2.04□□□□□ -2.08
UBR1YGR184C MSS11Q03825 758 aa2.04□□□□□ -2.08
UBR1YGR184C SPO77Q06134 477 aa2.04□□□□□ -2.08
UBR1YGR184C ATG31Q12421 196 aa2.04□□□□□ -2.08
UBR1YGR184C CAT8P39113 1433 aa2.04□□□□□ -2.08
UBR1YGR184C POM152P39685 1337 aa2.04□□□□□ -2.08
UBR1YGR184C MET16P18408 261 aaPredicted RBP2.04□□□□□ -2.08
UBR1YGR184C VPS1P21576 704 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C TIP1P27654 210 aaPredicted RBP2.04□□□□□ -2.08
UBR1YGR184C OAR1P35731 278 aa2.04□□□□□ -2.08
UBR1YGR184C THO1P40040 218 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C TMA22P47089 198 aaPredicted RBP2.04□□□□□ -2.08
UBR1YGR184C SWC4P53201 476 aa2.04□□□□□ -2.08
UBR1YGR184C CUS2P53830 285 aaPredicted RBP2.04□□□□□ -2.08
UBR1YGR184C SLT2Q00772 484 aa2.04□□□□□ -2.08
UBR1YGR184C YML108WQ03759 105 aa2.04□□□□□ -2.08
UBR1YGR184C CTS2Q06350 511 aa2.04□□□□□ -2.08
UBR1YGR184C SDO1Q07953 250 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C RPN8Q08723 338 aaKnown RBP2.04□□□□□ -2.08
UBR1YGR184C YDL009CQ12210 107 aa2.04□□□□□ -2.08
UBR1YGR184C PRP46Q12417 451 aaPredicted RBP2.04□□□□□ -2.08
UBR1YGR184C ESP1Q03018 1630 aa2.04□□□□□ -2.08
UBR1YGR184C SNQ2P32568 1501 aaKnown RBP2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 85.7 ms