RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C RAD14P28519 371 aa1.16□□□□□ -2.22
SEC3YER008C KAP104P38217 918 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C RTC2P38279 296 aa1.16□□□□□ -2.22
SEC3YER008C BIG1P38813 335 aa1.16□□□□□ -2.22
SEC3YER008C SPC97P38863 823 aa1.16□□□□□ -2.22
SEC3YER008C YJL070CP40361 888 aa1.16□□□□□ -2.22
SEC3YER008C PCI8P40512 444 aa1.16□□□□□ -2.22
SEC3YER008C SNL1P40548 159 aa1.16□□□□□ -2.22
SEC3YER008C BNA3P47039 444 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C ABM1P47146 123 aa1.16□□□□□ -2.22
SEC3YER008C SHR3Q02774 210 aa1.16□□□□□ -2.22
SEC3YER008C FIN1Q03898 291 aa1.16□□□□□ -2.22
SEC3YER008C FRE7Q12333 620 aa1.16□□□□□ -2.22
SEC3YER008C ADH2P00331 348 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C GCD2P12754 651 aaPredicted RBP1.16□□□□□ -2.22
SEC3YER008C PRP16P15938 1071 aaPredicted RBP1.16□□□□□ -2.22
SEC3YER008C ERG1P32476 496 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C MIC60P36112 540 aa1.16□□□□□ -2.22
SEC3YER008C BZZ1P38822 633 aa1.16□□□□□ -2.22
SEC3YER008C DHH1P39517 506 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C YIR014WP40570 242 aa1.16□□□□□ -2.22
SEC3YER008C EMC2P47133 292 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C ERG26P53199 349 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C EGD1Q02642 157 aaKnown RBP1.16□□□□□ -2.22
SEC3YER008C SNZ1Q03148 297 aa1.16□□□□□ -2.22
SEC3YER008C MMT1Q03218 510 aa1.16□□□□□ -2.22
SEC3YER008C URH1Q04179 340 aa1.16□□□□□ -2.22
SEC3YER008C ERV41Q04651 352 aa1.16□□□□□ -2.22
SEC3YER008C COQ11Q05892 277 aa1.16□□□□□ -2.22
SEC3YER008C YLR173WQ06247 608 aa1.16□□□□□ -2.22
SEC3YER008C ATG26Q06321 1198 aa1.16□□□□□ -2.22
SEC3YER008C GLE1Q12315 538 aa1.16□□□□□ -2.22
SEC3YER008C SAL1D6W196 494 aa1.15□□□□□ -2.22
SEC3YER008C SPS100P13130 326 aa1.15□□□□□ -2.22
SEC3YER008C HEM15P16622 393 aa1.15□□□□□ -2.22
SEC3YER008C YCP4P25349 247 aaKnown RBP1.15□□□□□ -2.22
SEC3YER008C MXR2P25566 168 aa1.15□□□□□ -2.22
SEC3YER008C NTG1P31378 399 aa1.15□□□□□ -2.22
SEC3YER008C CYS4P32582 507 aaKnown RBP1.15□□□□□ -2.22
SEC3YER008C OCT1P35999 772 aa1.15□□□□□ -2.22
SEC3YER008C INM1P38710 295 aa1.15□□□□□ -2.22
SEC3YER008C SIP3P38717 1229 aa1.15□□□□□ -2.22
SEC3YER008C ARN1P38731 627 aa1.15□□□□□ -2.22
SEC3YER008C PCF11P39081 626 aaPredicted RBP1.15□□□□□ -2.22
SEC3YER008C ISC1P40015 477 aaKnown RBP1.15□□□□□ -2.22
SEC3YER008C YFL067WP43537 175 aa1.15□□□□□ -2.22
SEC3YER008C YNL146WP53906 100 aa1.15□□□□□ -2.22
SEC3YER008C YPL080CQ02826 108 aa1.15□□□□□ -2.22
SEC3YER008C YMR310CQ04867 317 aaPredicted RBP1.15□□□□□ -2.22
SEC3YER008C YLR455WQ06188 304 aa1.15□□□□□ -2.22
SEC3YER008C PBP4Q07362 185 aaKnown RBP1.15□□□□□ -2.22
SEC3YER008C GAT3Q07928 141 aa1.15□□□□□ -2.22
SEC3YER008C BTS1Q12051 335 aa1.15□□□□□ -2.22
SEC3YER008C SLM3Q12093 417 aa1.15□□□□□ -2.22
SEC3YER008C BUG1Q12191 341 aa1.15□□□□□ -2.22
SEC3YER008C FSH3Q99369 266 aa1.15□□□□□ -2.22
SEC3YER008C MAS1P10507 462 aa1.15□□□□□ -2.23
SEC3YER008C RNA1P11745 407 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C DAL2P25335 343 aa1.15□□□□□ -2.23
SEC3YER008C ICL1P28240 557 aaPredicted RBP1.15□□□□□ -2.23
SEC3YER008C SAC1P32368 623 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C ECM25P32525 599 aa1.15□□□□□ -2.23
SEC3YER008C REC114P32841 428 aa1.15□□□□□ -2.23
SEC3YER008C SKT5P34226 696 aa1.15□□□□□ -2.23
SEC3YER008C MYO3P36006 1272 aa1.15□□□□□ -2.23
SEC3YER008C CBT1P36038 271 aaPredicted RBP1.15□□□□□ -2.23
SEC3YER008C YKR015CP36111 568 aa1.15□□□□□ -2.23
SEC3YER008C LDB7P38210 180 aa1.15□□□□□ -2.23
SEC3YER008C CIN4P39110 191 aa1.15□□□□□ -2.23
SEC3YER008C YGR168CP53293 376 aa1.15□□□□□ -2.23
SEC3YER008C ARP5P53946 755 aa1.15□□□□□ -2.23
SEC3YER008C RLI1Q03195 608 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C ENT5Q03769 411 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C YOR387CQ08910 206 aa1.15□□□□□ -2.23
SEC3YER008C YPQ1Q12010 308 aa1.15□□□□□ -2.23
SEC3YER008C BSC1Q12140 328 aa1.15□□□□□ -2.23
SEC3YER008C PRP46Q12417 451 aaPredicted RBP1.15□□□□□ -2.23
SEC3YER008C MEX67Q99257 599 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C DET1Q99288 334 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C YOR338WQ99326 363 aa1.15□□□□□ -2.23
SEC3YER008C RAD1P06777 1100 aa1.15□□□□□ -2.23
SEC3YER008C DST1P07273 309 aa1.15□□□□□ -2.23
SEC3YER008C SSA3P09435 649 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C YLL053CP0CD98 152 aa1.15□□□□□ -2.23
SEC3YER008C MAK32P23060 363 aa1.15□□□□□ -2.23
SEC3YER008C YCR022CP25620 114 aa1.15□□□□□ -2.23
SEC3YER008C KRE2P27809 442 aa1.15□□□□□ -2.23
SEC3YER008C ATS1P31386 333 aa1.15□□□□□ -2.23
SEC3YER008C MET30P39014 640 aa1.15□□□□□ -2.23
SEC3YER008C HEM14P40012 539 aa1.15□□□□□ -2.23
SEC3YER008C GAT2P40209 560 aa1.15□□□□□ -2.23
SEC3YER008C SIM1P40472 476 aa1.15□□□□□ -2.23
SEC3YER008C LYS20P48570 428 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C ASN2P49090 572 aaKnown RBP1.15□□□□□ -2.23
SEC3YER008C TOM22P49334 152 aa1.15□□□□□ -2.23
SEC3YER008C NAS6P50086 228 aa1.15□□□□□ -2.23
SEC3YER008C HXT11P54862 567 aa1.15□□□□□ -2.23
SEC3YER008C YPL068CQ02749 293 aa1.15□□□□□ -2.23
SEC3YER008C ECI1Q05871 280 aa1.15□□□□□ -2.23
SEC3YER008C RRG8Q06109 277 aa1.15□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms