RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	PRO2	P54885	456 aa	Known RBP	3.21	□□□□□ -1.9
PHO88	YBR106W	VPS20	Q04272	221 aa		3.21	□□□□□ -1.9
PHO88	YBR106W	RRN11	Q04712	507 aa		3.21	□□□□□ -1.9
PHO88	YBR106W	YMR034C	Q05131	434 aa	Predicted RBP	3.21	□□□□□ -1.9
PHO88	YBR106W	ECM7	Q06200	448 aa		3.21	□□□□□ -1.9
PHO88	YBR106W	YPR078C	Q06813	372 aa		3.21	□□□□□ -1.9
PHO88	YBR106W	LOT6	Q07923	191 aa		3.21	□□□□□ -1.9
PHO88	YBR106W	RUD3	Q12234	484 aa	Known RBP	3.21	□□□□□ -1.9
PHO88	YBR106W	YRM1	Q12340	786 aa		3.21	□□□□□ -1.9
PHO88	YBR106W	PFK27	Q12471	397 aa	Predicted RBP	3.21	□□□□□ -1.9
PHO88	YBR106W	VMR1	P38735	1592 aa		3.21	□□□□□ -1.9
PHO88	YBR106W	CAT8	P39113	1433 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.2	□□□□□ -1.9	RIP-Chip
PHO88	YBR106W	CDC23	P16522	626 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	OM45	P16547	393 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	SAG1	P20840	650 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	GRR1	P24814	1151 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	RPL5	P26321	297 aa	Known RBP	3.2	□□□□□ -1.9
PHO88	YBR106W	YHR131C	P38835	850 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	MDM31	P38880	579 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	VPS45	P38932	577 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	MNN9	P39107	395 aa	Known RBP	3.2	□□□□□ -1.9
PHO88	YBR106W	AIM20	P40451	204 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	TES1	P41903	349 aa	Known RBP	3.2	□□□□□ -1.9
PHO88	YBR106W	YFL067W	P43537	175 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	YHC3	P47040	408 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	YGR266W	P53326	701 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	LSC1	P53598	329 aa	Known RBP	3.2	□□□□□ -1.9
PHO88	YBR106W	SPR6	Q01684	191 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	YPL068C	Q02749	293 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	PIR3	Q03180	325 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	RNH203	Q12338	110 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	NCA2	Q12374	616 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	YOP1	Q12402	180 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	RRP12	Q12754	1228 aa	Known RBP	3.2	□□□□□ -1.9
PHO88	YBR106W	RGS2	Q99188	309 aa		3.2	□□□□□ -1.9
PHO88	YBR106W	YLL053C	P0CD98	152 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	IMA3	P0CW40	589 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	IMA4	P0CW41	589 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	CLN3	P13365	580 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	SAM2	P19358	384 aa	Known RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	PUT3	P25502	979 aa	Predicted RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	YCL068C	P25593	260 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	PRO3	P32263	286 aa	Known RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	RAD5	P32849	1169 aa	Predicted RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	SDH3	P33421	198 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	MCR1	P36060	302 aa	Known RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	MRPL40	P36534	297 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	NAT2	P37293	288 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	MIX23	P38162	196 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	YHR122W	P38829	231 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	LIN1	P38852	340 aa	Predicted RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	FAA2	P39518	744 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	LOH1	P47055	219 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	AVT4	P50944	713 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	RRP46	P53256	223 aa	Predicted RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	CWC21	Q03375	135 aa	Known RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	BCH1	Q05029	724 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	ATG38	Q05789	226 aa	Known RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	MSC3	Q05812	728 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	YLR297W	Q05899	129 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	SNT309	Q06091	175 aa	Predicted RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	ARR1	Q06596	294 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	MDM36	Q06820	579 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	IMA2	Q08295	589 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	RAX1	Q08760	435 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	YLR108C	Q12259	485 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	SFG1	Q12507	346 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	SET6	Q12529	373 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	HTZ1	Q12692	134 aa	Known RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	MEX67	Q99257	599 aa	Known RBP	3.19	□□□□□ -1.9
PHO88	YBR106W	FSH3	Q99369	266 aa		3.19	□□□□□ -1.9
PHO88	YBR106W	HEM2	P05373	342 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	RPB4	P20433	221 aa	Predicted RBP	3.18	□□□□□ -1.9
PHO88	YBR106W	MUD1	P32605	298 aa	Known RBP	3.18	□□□□□ -1.9
PHO88	YBR106W	YEF1	P32622	495 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	MRP4	P32902	394 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	LOS1	P33418	1100 aa	Predicted RBP	3.18	□□□□□ -1.9
PHO88	YBR106W	PCH2	P38126	564 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	CHK1	P38147	527 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	MTC4	P38335	694 aa	Known RBP	3.18	□□□□□ -1.9
PHO88	YBR106W	MTC6	P38849	526 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	END3	P39013	349 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	RPH1	P39956	796 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	LCP5	P40079	357 aa	Predicted RBP	3.18	□□□□□ -1.9
PHO88	YBR106W	MAM33	P40513	266 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	YFR018C	P43599	363 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	PHB2	P50085	310 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	LSB1	P53281	241 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	TRM112	P53738	135 aa	Predicted RBP	3.18	□□□□□ -1.9
PHO88	YBR106W	CRZ1	P53968	678 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	RRN5	Q02983	363 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	DIG1	Q03063	452 aa	Known RBP	3.18	□□□□□ -1.9
PHO88	YBR106W	YMR010W	Q03687	405 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	CCE1	Q03702	353 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	PRM6	Q04705	352 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	YDR262W	Q12331	272 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	POM152	P39685	1337 aa		3.18	□□□□□ -1.9
PHO88	YBR106W	BCK1	Q01389	1478 aa		3.17	□□□□□ -1.9
PHO88	YBR106W	RPL15A	P05748	204 aa	Known RBP	3.17	□□□□□ -1.9

Retrieved 100 of 5,963 RNA–protein pairs in 61.9 ms