RNA–Protein interactions for RNA: ENST00000621708.4

PCDH15-233, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PCDH15, Length 5,700 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-233ENST00000621708 DONSONQ9NYP3 566 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 NFAT5O94916 1531 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 E9PMD0 336 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 TNPO2O14787 897 aaKnown RBP9.47□□□□□ -0.89
PCDH15-233ENST00000621708 MAGEB2O15479 319 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 MAPK4P31152 587 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 GTF2A2P52657 109 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 DNAJC24Q6P3W2 148 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 SCYL2Q6P3W7 929 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 ZBTB33Q86T24 672 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 PROCA1Q8NCQ7 364 aaPredicted RBP9.47□□□□□ -0.89
PCDH15-233ENST00000621708 SMARCAD1Q9H4L7 1026 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 ASAP2O43150 1006 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 GH1P01241 217 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 MARK3P27448 753 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 SETDB1Q15047 1291 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 TAF1CQ15572 869 aaPredicted RBP9.47□□□□□ -0.89
PCDH15-233ENST00000621708 HVCN1Q96D96 273 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 SMC6Q96SB8 1091 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.47□□□□□ -0.89
PCDH15-233ENST00000621708 COL14A1Q05707 1796 aaKnown RBP9.47□□□□□ -0.89
PCDH15-233ENST00000621708 PDXKO00764 312 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 ZNF189O75820 626 aaPredicted RBP9.47□□□□□ -0.89
PCDH15-233ENST00000621708 OATP04181 439 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 ANXA13P27216 316 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 ZBTB16Q05516 673 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 BFSP1Q12934 665 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 DENND2CQ68D51 928 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 TTBK2Q6IQ55 1244 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 PPM1EQ8WY54 764 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 GPRASP2Q96D09 838 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 TBC1D31Q96DN5 1066 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 C7orf25Q9BPX7 421 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 POLR3FQ9H1D9 316 aaPredicted RBP9.47□□□□□ -0.89
PCDH15-233ENST00000621708 JMJD4Q9H9V9 463 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 KIF28PB7ZC32 967 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 PRPSAP1Q14558 356 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 MXD4Q14582 209 aaPredicted RBP9.47□□□□□ -0.89
PCDH15-233ENST00000621708 ERCC6LQ2NKX8 1250 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 CFAP157Q5JU67 520 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 FRMD5Q7Z6J6 570 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 THEM5Q8N1Q8 247 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 DESI2Q9BSY9 194 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 LRRC4Q9HBW1 653 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 JRKLQ9Y4A0 524 aa9.47□□□□□ -0.89
PCDH15-233ENST00000621708 AKAP12Q02952 1782 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 ICAM1P05362 532 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 ARL1P40616 181 aaPredicted RBP9.46□□□□□ -0.89
PCDH15-233ENST00000621708 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.89
PCDH15-233ENST00000621708 FYB2Q5VWT5 728 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 CPLX4Q7Z7G2 160 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 GPRC5AQ8NFJ5 357 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 URGCPQ8TCY9 931 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 CDC23Q9UJX2 597 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.89
PCDH15-233ENST00000621708 DENND3A2RUS2 1198 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 MFAP3LO75121 409 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 GTF2F1P35269 517 aaKnown RBP eCLIP9.46□□□□□ -0.89
PCDH15-233ENST00000621708 GPC3P51654 580 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 STAT5BP51692 787 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 RASSF7Q02833 373 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 ZNF568Q3ZCX4 644 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 AFAP1L1Q8TED9 768 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 SEPT1Q8WYJ6 367 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 ATP2A3Q93084 1043 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 GOLPH3LQ9H4A5 285 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 GJB4Q9NTQ9 266 aa9.46□□□□□ -0.89
PCDH15-233ENST00000621708 A0A1W2PQC6 194 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 RNASE9P60153 205 aaKnown RBP9.46□□□□□ -0.9
PCDH15-233ENST00000621708 DEFB132Q7Z7B7 95 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 ERO1BQ86YB8 467 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 PPP1R13BQ96KQ4 1090 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 MXRA8Q9BRK3 442 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 VPS18Q9P253 973 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 GDAQ9Y2T3 454 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 GOLGA8CPA6NN73 597 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 BUB1O43683 1085 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 GAS2O43903 313 aaKnown RBP9.46□□□□□ -0.9
PCDH15-233ENST00000621708 SRGAP2BP0DMP2 458 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 GCLCP48506 637 aaPredicted RBP9.46□□□□□ -0.9
PCDH15-233ENST00000621708 BAATQ14032 418 aaPredicted RBP9.46□□□□□ -0.9
PCDH15-233ENST00000621708 SHC4Q6S5L8 630 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 DSTYKQ6XUX3 929 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 FAM49AQ9H0Q0 323 aaPredicted RBP9.46□□□□□ -0.9
PCDH15-233ENST00000621708 NHEJ1Q9H9Q4 299 aaPredicted RBP9.46□□□□□ -0.9
PCDH15-233ENST00000621708 FAM114A2Q9NRY5 505 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 STRIP2Q9ULQ0 834 aa9.46□□□□□ -0.9
PCDH15-233ENST00000621708 POTEFA5A3E0 1075 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 NR3C2P08235 984 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 POTEIP0CG38 1075 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 TXNP10599 105 aaKnown RBP9.45□□□□□ -0.9
PCDH15-233ENST00000621708 KIAA1841Q6NSI8 718 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 POTEGQ6S5H5 508 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 POTEEQ6S8J3 1075 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 TRIM72Q6ZMU5 477 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 TMEM39BQ9GZU3 492 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 PARP4Q9UKK3 1724 aaKnown RBP9.45□□□□□ -0.9
PCDH15-233ENST00000621708 GFPT2O94808 682 aa9.45□□□□□ -0.9
PCDH15-233ENST00000621708 RPLP2P05387 115 aaKnown RBP9.45□□□□□ -0.9
PCDH15-233ENST00000621708 ATF2P15336 505 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms