RNA–Protein interactions for RNA: ENST00000598059.5

SYMPK-208, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-208ENST00000598059 COL1A2P08123 1366 aa24.19■■□□□ 1.46
SYMPK-208ENST00000598059 ZBTB42B2RXF5 422 aa24.19■■□□□ 1.46
SYMPK-208ENST00000598059 IFNAR1P17181 557 aa24.19■■□□□ 1.46
SYMPK-208ENST00000598059 ATP4AP20648 1035 aa24.19■■□□□ 1.46
SYMPK-208ENST00000598059 PDIA3P30101 505 aaKnown RBP24.19■■□□□ 1.46
SYMPK-208ENST00000598059 CIITAP33076 1130 aa24.19■■□□□ 1.46
SYMPK-208ENST00000598059 PAK2Q13177 524 aa24.19■■□□□ 1.46
SYMPK-208ENST00000598059 BTG3Q14201 252 aaPredicted RBP24.19■■□□□ 1.46
SYMPK-208ENST00000598059 ZNF746Q6NUN9 644 aaPredicted RBP24.19■■□□□ 1.46
SYMPK-208ENST00000598059 RASGRP4Q8TDF6 673 aa24.19■■□□□ 1.46
SYMPK-208ENST00000598059 LARP6Q9BRS8 491 aaKnown RBP24.19■■□□□ 1.46
SYMPK-208ENST00000598059 SLC26A6Q9BXS9 759 aa24.19■■□□□ 1.46
SYMPK-208ENST00000598059 MAFBQ9Y5Q3 323 aaPredicted RBP24.19■■□□□ 1.46
SYMPK-208ENST00000598059 CCT2P78371 535 aaKnown RBP24.18■■□□□ 1.46
SYMPK-208ENST00000598059 PRR16Q569H4 304 aa24.18■■□□□ 1.46
SYMPK-208ENST00000598059 TCEAL5Q5H9L2 206 aa24.18■■□□□ 1.46
SYMPK-208ENST00000598059 ZNF484Q5JVG2 852 aa24.18■■□□□ 1.46
SYMPK-208ENST00000598059 KIAA0319LQ8IZA0 1049 aa24.18■■□□□ 1.46
SYMPK-208ENST00000598059 CCDC148Q8NFR7 591 aa24.18■■□□□ 1.46
SYMPK-208ENST00000598059 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.18■■□□□ 1.46
SYMPK-208ENST00000598059 C11orf84Q9BUA3 381 aaPredicted RBP24.18■■□□□ 1.46
SYMPK-208ENST00000598059 NSUN3Q9H649 340 aaKnown RBP24.18■■□□□ 1.46
SYMPK-208ENST00000598059 NCOA5Q9HCD5 579 aaKnown RBP24.18■■□□□ 1.46
SYMPK-208ENST00000598059 COL9A1P20849 921 aa24.17■■□□□ 1.46
SYMPK-208ENST00000598059 TMEM266Q2M3C6 531 aa24.17■■□□□ 1.46
SYMPK-208ENST00000598059 NPAS4Q8IUM7 802 aa24.17■■□□□ 1.46
SYMPK-208ENST00000598059 SMAP1Q8IYB5 467 aaPredicted RBP24.17■■□□□ 1.46
SYMPK-208ENST00000598059 LENG9Q96B70 501 aa24.17■■□□□ 1.46
SYMPK-208ENST00000598059 TMX1Q9H3N1 280 aa24.17■■□□□ 1.46
SYMPK-208ENST00000598059 VPS54Q9P1Q0 977 aa24.17■■□□□ 1.46
SYMPK-208ENST00000598059 TRIOO75962 3097 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 GRM6O15303 877 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 COL19A1Q14993 1142 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 CKAP2LQ8IYA6 745 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 NEK9Q8TD19 979 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 BBXQ8WY36 941 aaPredicted RBP24.16■■□□□ 1.46
SYMPK-208ENST00000598059 LMAN2LQ9H0V9 348 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 CDHR5Q9HBB8 845 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 TSHZ2Q9NRE2 1034 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 TPCN1Q9ULQ1 816 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 GINS2Q9Y248 185 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 PCDHA10Q9Y5I2 948 aa24.16■■□□□ 1.46
SYMPK-208ENST00000598059 KIAA1671Q9BY89 1806 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 EDIL3O43854 480 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 ST18O60284 1047 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 PSAPP07602 524 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 NFX1Q12986 1120 aaKnown RBP24.15■■□□□ 1.46
SYMPK-208ENST00000598059 ANKRD1Q15327 319 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 CMTR2Q8IYT2 770 aaKnown RBP24.15■■□□□ 1.46
SYMPK-208ENST00000598059 TMEM40Q8WWA1 233 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 PABPC5Q96DU9 382 aaKnown RBP24.15■■□□□ 1.46
SYMPK-208ENST00000598059 PLVAPQ9BX97 442 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 C1QTNF1Q9BXJ1 281 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 SH3GLB2Q9NR46 395 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 TCEAL9Q9UHQ7 104 aa24.15■■□□□ 1.46
SYMPK-208ENST00000598059 C22orf31O95567 290 aa24.14■■□□□ 1.45
SYMPK-208ENST00000598059 STAG3L1P0CL83 205 aa24.14■■□□□ 1.45
SYMPK-208ENST00000598059 PTCRAQ6ISU1 281 aaPredicted RBP24.14■■□□□ 1.45
SYMPK-208ENST00000598059 FAM43BQ6ZT52 329 aaPredicted RBP24.14■■□□□ 1.45
SYMPK-208ENST00000598059 ERVK-5Q9HDB9 667 aa24.14■■□□□ 1.45
SYMPK-208ENST00000598059 GABBR1Q9UBS5 961 aa24.14■■□□□ 1.45
SYMPK-208ENST00000598059 NOC2LQ9Y3T9 749 aaKnown RBP24.14■■□□□ 1.45
SYMPK-208ENST00000598059 MRPL42Q9Y6G3 142 aaKnown RBP24.14■■□□□ 1.45
SYMPK-208ENST00000598059 H3BQ06 376 aaPredicted RBP24.13■■□□□ 1.45
SYMPK-208ENST00000598059 RPS6KA5O75582 802 aa24.13■■□□□ 1.45
SYMPK-208ENST00000598059 LARGE1O95461 756 aa24.13■■□□□ 1.45
SYMPK-208ENST00000598059 USP11P51784 963 aa24.13■■□□□ 1.45
SYMPK-208ENST00000598059 TRMT1LQ7Z2T5 733 aaKnown RBP24.13■■□□□ 1.45
SYMPK-208ENST00000598059 ZNF274Q96GC6 653 aaPredicted RBP24.13■■□□□ 1.45
SYMPK-208ENST00000598059 EPHX3Q9H6B9 360 aa24.13■■□□□ 1.45
SYMPK-208ENST00000598059 CD320Q9NPF0 282 aa24.13■■□□□ 1.45
SYMPK-208ENST00000598059 SAMM50Q9Y512 469 aa24.13■■□□□ 1.45
SYMPK-208ENST00000598059 GRXCR2A6NFK2 248 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 MSH4O15457 936 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 MGEA5O60502 916 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 IL9P15248 144 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 SARSP49591 514 aaKnown RBP24.12■■□□□ 1.45
SYMPK-208ENST00000598059 NLRP5P59047 1200 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 ME3Q16798 604 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 KIZQ2M2Z5 673 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 PUS10Q3MIT2 529 aaKnown RBP24.12■■□□□ 1.45
SYMPK-208ENST00000598059 FAM178BQ8IXR5 827 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 TRIM22Q8IYM9 498 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 METTL13Q8N6R0 699 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 KHSRPQ92945 711 aaKnown RBP eCLIP24.12■■□□□ 1.45
SYMPK-208ENST00000598059 P2RX5Q93086 422 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 ALG13Q9NP73 1137 aaKnown RBP24.12■■□□□ 1.45
SYMPK-208ENST00000598059 PLAGL2Q9UPG8 496 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 CEP131Q9UPN4 1083 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 LIMCH1Q9UPQ0 1083 aa24.12■■□□□ 1.45
SYMPK-208ENST00000598059 FNDC1Q4ZHG4 1894 aaPredicted RBP24.11■■□□□ 1.45
SYMPK-208ENST00000598059 WDR64B1ANS9 1081 aa24.11■■□□□ 1.45
SYMPK-208ENST00000598059 NCK2O43639 380 aa24.11■■□□□ 1.45
SYMPK-208ENST00000598059 MMP1P03956 469 aa24.11■■□□□ 1.45
SYMPK-208ENST00000598059 CRYBB1P53674 252 aaPredicted RBP24.11■■□□□ 1.45
SYMPK-208ENST00000598059 SSRP1Q08945 709 aaKnown RBP24.11■■□□□ 1.45
SYMPK-208ENST00000598059 PAN2Q504Q3 1202 aaKnown RBP24.11■■□□□ 1.45
SYMPK-208ENST00000598059 EP400NLQ6ZTU2 488 aa24.11■■□□□ 1.45
SYMPK-208ENST00000598059 SNX21Q969T3 373 aa24.11■■□□□ 1.45
SYMPK-208ENST00000598059 PPP1R16BQ96T49 567 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms