RNA–Protein interactions for RNA: ENST00000597453.1

TGFB1-202, Transcript of transforming growth factor beta 1, humanhuman

TSL 1 (best)

Gene TGFB1, Length 392 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-202ENST00000597453 NME8Q8N427 588 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 TMEM40Q8WWA1 233 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 CLP1Q92989 425 aaKnown RBP17.19■□□□□ 0.34
TGFB1-202ENST00000597453 LENG9Q96B70 501 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 FTHL17Q9BXU8 183 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 CDHR5Q9HBB8 845 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 TBC1D22BQ9NU19 505 aa17.19■□□□□ 0.34
TGFB1-202ENST00000597453 RB1P06400 928 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 COL9A1P20849 921 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 CIITAP33076 1130 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 ZNF484Q5JVG2 852 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 NPAS4Q8IUM7 802 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 CCDC148Q8NFR7 591 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 KHSRPQ92945 711 aaKnown RBP eCLIP17.18■□□□□ 0.34
TGFB1-202ENST00000597453 NSUN3Q9H649 340 aaKnown RBP17.18■□□□□ 0.34
TGFB1-202ENST00000597453 CD320Q9NPF0 282 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 RAPGEFL1Q9UHV5 662 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 GINS2Q9Y248 185 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 NOC2LQ9Y3T9 749 aaKnown RBP17.18■□□□□ 0.34
TGFB1-202ENST00000597453 RWDD3Q9Y3V2 267 aa17.18■□□□□ 0.34
TGFB1-202ENST00000597453 MAFBQ9Y5Q3 323 aaPredicted RBP17.18■□□□□ 0.34
TGFB1-202ENST00000597453 MRPL42Q9Y6G3 142 aaKnown RBP17.18■□□□□ 0.34
TGFB1-202ENST00000597453 FNDC1Q4ZHG4 1894 aaPredicted RBP17.18■□□□□ 0.34
TGFB1-202ENST00000597453 H3BQ06 376 aaPredicted RBP17.17■□□□□ 0.34
TGFB1-202ENST00000597453 C22orf31O95567 290 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 IL9P15248 144 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 GATMP50440 423 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 COL19A1Q14993 1142 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 TRMT1LQ7Z2T5 733 aaKnown RBP17.17■□□□□ 0.34
TGFB1-202ENST00000597453 CKAP2LQ8IYA6 745 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 SMAP1Q8IYB5 467 aaPredicted RBP17.17■□□□□ 0.34
TGFB1-202ENST00000597453 BICD2Q8TD16 824 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 NEK9Q8TD19 979 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 PPP1R16BQ96T49 567 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 C11orf84Q9BUA3 381 aaPredicted RBP17.17■□□□□ 0.34
TGFB1-202ENST00000597453 EPHX3Q9H6B9 360 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 ERVK-5Q9HDB9 667 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 GABBR1Q9UBS5 961 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 CYP46A1Q9Y6A2 500 aa17.17■□□□□ 0.34
TGFB1-202ENST00000597453 PLXNA4Q9HCM2 1894 aa17.16■□□□□ 0.34
TGFB1-202ENST00000597453 MGEA5O60502 916 aa17.16■□□□□ 0.34
TGFB1-202ENST00000597453 CSPG5O95196 566 aa17.16■□□□□ 0.34
TGFB1-202ENST00000597453 SEC24BO95487 1268 aa17.16■□□□□ 0.34
TGFB1-202ENST00000597453 NFX1Q12986 1120 aaKnown RBP17.16■□□□□ 0.34
TGFB1-202ENST00000597453 PAN2Q504Q3 1202 aaKnown RBP17.16■□□□□ 0.34
TGFB1-202ENST00000597453 PTCRAQ6ISU1 281 aaPredicted RBP17.16■□□□□ 0.34
TGFB1-202ENST00000597453 CMTR2Q8IYT2 770 aaKnown RBP17.16■□□□□ 0.34
TGFB1-202ENST00000597453 BBXQ8WY36 941 aaPredicted RBP17.16■□□□□ 0.34
TGFB1-202ENST00000597453 PABPC5Q96DU9 382 aaKnown RBP17.16■□□□□ 0.34
TGFB1-202ENST00000597453 LARP6Q9BRS8 491 aaKnown RBP17.16■□□□□ 0.34
TGFB1-202ENST00000597453 PCDHA10Q9Y5I2 948 aa17.16■□□□□ 0.34
TGFB1-202ENST00000597453 MSH4O15457 936 aa17.15■□□□□ 0.34
TGFB1-202ENST00000597453 RPS6KA5O75582 802 aa17.15■□□□□ 0.34
TGFB1-202ENST00000597453 PSAPP07602 524 aa17.15■□□□□ 0.34
TGFB1-202ENST00000597453 IBSPP21815 317 aaPredicted RBP17.15■□□□□ 0.34
TGFB1-202ENST00000597453 KIZQ2M2Z5 673 aa17.15■□□□□ 0.34
TGFB1-202ENST00000597453 FAM178BQ8IXR5 827 aa17.15■□□□□ 0.34
TGFB1-202ENST00000597453 GJA10Q969M2 543 aa17.15■□□□□ 0.34
TGFB1-202ENST00000597453 UPF3BQ9BZI7 483 aaKnown RBP17.15■□□□□ 0.34
TGFB1-202ENST00000597453 LMAN2LQ9H0V9 348 aa17.15■□□□□ 0.34
TGFB1-202ENST00000597453 ALG13Q9NP73 1137 aaKnown RBP17.15■□□□□ 0.34
TGFB1-202ENST00000597453 TCEAL9Q9UHQ7 104 aa17.15■□□□□ 0.34
TGFB1-202ENST00000597453 GRXCR2A6NFK2 248 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 ZNF862O60290 1169 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 MMP1P03956 469 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 VTNP04004 478 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 STAG3L1P0CL83 205 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 DNAJB1P25685 340 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 NLRP5P59047 1200 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 CAMK1Q14012 370 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 EP400NLQ6ZTU2 488 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 FAM228AQ86W67 206 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 OSMRQ99650 979 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 PLVAPQ9BX97 442 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 C1QTNF1Q9BXJ1 281 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 SH3GLB2Q9NR46 395 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 CLDND1Q9NY35 253 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 ST3GAL5Q9UNP4 418 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 PLAGL2Q9UPG8 496 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 SAMM50Q9Y512 469 aa17.14■□□□□ 0.33
TGFB1-202ENST00000597453 WDR64B1ANS9 1081 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 ITGB1P05556 798 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 LTBRP36941 435 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 SARSP49591 514 aaKnown RBP17.13■□□□□ 0.33
TGFB1-202ENST00000597453 CLCN3P51790 818 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 CRYBB1P53674 252 aaPredicted RBP17.13■□□□□ 0.33
TGFB1-202ENST00000597453 SSRP1Q08945 709 aaKnown RBP17.13■□□□□ 0.33
TGFB1-202ENST00000597453 HYAL1Q12794 435 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 UGCGQ16739 394 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 TRIM22Q8IYM9 498 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 METTL13Q8N6R0 699 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 LINC01465Q8N7H1 131 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 TBCKQ8TEA7 893 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 SLC5A5Q92911 643 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 P2RX5Q93086 422 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 AIFM3Q96NN9 605 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 ADAM2Q99965 735 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 RGS18Q9NS28 235 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 LRFN2Q9ULH4 789 aa17.13■□□□□ 0.33
TGFB1-202ENST00000597453 PCDHA4Q9UN74 947 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms