RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 KRT40Q6A162 431 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 FBXO22Q8NEZ5 403 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 GDPD5Q8WTR4 605 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 C17orf80Q9BSJ5 609 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 MTUS1Q9ULD2 1270 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 PADI3Q9ULW8 664 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 SAMM50Q9Y512 469 aa20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 PRRC2BQ5JSZ5 2229 aaKnown RBP20.26■□□□□ 0.83
CHMP2A-203ENST00000597209 MAGEB2O15479 319 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 EPC2Q52LR7 807 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 ODR4Q5SWX8 454 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 LRCH2Q5VUJ6 765 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 B3GNT9Q6UX72 402 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 RTN4RL1Q86UN2 441 aaPredicted RBP20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 WASF1Q92558 559 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 ZNF689Q96CS4 500 aaPredicted RBP20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 RC3H2Q9HBD1 1191 aaKnown RBP20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 NRBP2Q9NSY0 501 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 KCNJ14Q9UNX9 436 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 COG5Q9UP83 839 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 CUL9Q8IWT3 2517 aa20.25■□□□□ 0.83
CHMP2A-203ENST00000597209 TTC3P53804 2025 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 WDR81Q562E7 1941 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 CTDNEP1O95476 244 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 TDP2O95551 362 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 PAK2Q13177 524 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 AAK1Q2M2I8 961 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 CRIPAKQ8N1N5 446 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 ZNF710Q8N1W2 664 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 FIBCD1Q8N539 461 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 ETNPPLQ8TBG4 499 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 LINC01599Q8WXQ3 324 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 UNC45AQ9H3U1 944 aa20.24■□□□□ 0.83
CHMP2A-203ENST00000597209 H3BNC9 293 aa20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 ZNF862O60290 1169 aa20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 OATP04181 439 aa20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 SKIV2LQ15477 1246 aaKnown RBP20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 RALGAPA2Q2PPJ7 1873 aa20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 TMEM192Q8IY95 271 aa20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 LINC01465Q8N7H1 131 aa20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 ORC3Q9UBD5 711 aaPredicted RBP20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 RWDD3Q9Y3V2 267 aa20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 LOXHD1Q8IVV2 1947 aa20.23■□□□□ 0.83
CHMP2A-203ENST00000597209 CCDC194A0A1B0GVG4 234 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 DGKIO75912 1065 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 RB1P06400 928 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 CRYBB1P53674 252 aaPredicted RBP20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 ME3Q16798 604 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 INF2Q27J81 1249 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 PPP4R3AQ6IN85 833 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 NPAS4Q8IUM7 802 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 GTF3C6Q969F1 213 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 NAP1L4Q99733 375 aaKnown RBP20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 CDHR5Q9HBB8 845 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 ERVK-5Q9HDB9 667 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 DDX25Q9UHL0 483 aaKnown RBP20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 NOC2LQ9Y3T9 749 aaKnown RBP20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 ADGRA3Q8IWK6 1321 aa20.22■□□□□ 0.83
CHMP2A-203ENST00000597209 EVPLQ92817 2033 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 CHMP2AO43633 222 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 GPR32O75388 356 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 RPS6KA5O75582 802 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 LINC00271P0C7V0 271 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 STAG3L1P0CL83 205 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 FDPSP14324 419 aaKnown RBP20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 GCFC2P16383 781 aaKnown RBP20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 TMOD1P28289 359 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 PRKCEQ02156 737 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 PTPROQ16827 1216 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 MIER3Q7Z3K6 550 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 NEK8Q86SG6 692 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 CLP1Q92989 425 aaKnown RBP20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 HLA-CQ95604 372 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 GJA10Q969M2 543 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 MRPL38Q96DV4 380 aaKnown RBP20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 TMX1Q9H3N1 280 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 NLRC5Q86WI3 1866 aa20.21■□□□□ 0.83
CHMP2A-203ENST00000597209 GPR182O15218 404 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 SEC24BO95487 1268 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 BMPR1AP36894 532 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 NEK4P51957 841 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 GPM6BQ13491 265 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 TARBP2Q15633 366 aaKnown RBP20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 UGCGQ16739 394 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 LETM2Q2VYF4 491 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 EFCAB12Q6NXP0 572 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 TRMT1LQ7Z2T5 733 aaKnown RBP20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 METTL13Q8N6R0 699 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 TMEM40Q8WWA1 233 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 FAM20AQ96MK3 541 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 NIFKQ9BYG3 293 aaKnown RBP20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 KCNMB3Q9NPA1 279 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 GINS2Q9Y248 185 aa20.2■□□□□ 0.82
CHMP2A-203ENST00000597209 TBX3O15119 743 aa20.19■□□□□ 0.82
CHMP2A-203ENST00000597209 SLC37A4O43826 429 aa20.19■□□□□ 0.82
CHMP2A-203ENST00000597209 LARGE1O95461 756 aa20.19■□□□□ 0.82
CHMP2A-203ENST00000597209 BMP1P13497 986 aa20.19■□□□□ 0.82
CHMP2A-203ENST00000597209 NFX1Q12986 1120 aaKnown RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms