RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 TRIM43BA6NCK2 446 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 ZBTB42B2RXF5 422 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 MAGEB2O15479 319 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 RPLP2P05387 115 aaKnown RBP17.35■□□□□ 0.37
GHDC-209ENST00000588762 CDC25AP30304 524 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 TBC1D8BQ0IIM8 1120 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 XKR9Q5GH70 373 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 MTHFD1LQ6UB35 978 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 ANO5Q75V66 913 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 RSPH3Q86UC2 560 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 CAGE1Q8TC20 777 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 KCNG4Q8TDN1 519 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 TRIM43Q96BQ3 446 aaPredicted RBP17.35■□□□□ 0.37
GHDC-209ENST00000588762 CDK5RAP3Q96JB5 506 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 IPO9Q96P70 1041 aaKnown RBP17.35■□□□□ 0.37
GHDC-209ENST00000588762 LBHD1Q9BQE6 289 aaPredicted RBP17.35■□□□□ 0.37
GHDC-209ENST00000588762 NOC4LQ9BVI4 516 aaKnown RBP17.35■□□□□ 0.37
GHDC-209ENST00000588762 PPP1R12CQ9BZL4 782 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 ANKEF1Q9NU02 776 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 PCDHA2Q9Y5H9 948 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 KDM3AQ9Y4C1 1321 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 TANC1Q9C0D5 1861 aa17.35■□□□□ 0.37
GHDC-209ENST00000588762 TMEM150BA6NC51 233 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 PITPNM1O00562 1244 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 SLC26A4O43511 780 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 PPP6R2O75170 966 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 TIMP1P01033 207 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 XRCC6P12956 609 aaKnown RBP eCLIP17.34■□□□□ 0.37
GHDC-209ENST00000588762 TARBP2Q15633 366 aaKnown RBP17.34■□□□□ 0.37
GHDC-209ENST00000588762 ZRSR1Q15695 479 aaKnown RBP17.34■□□□□ 0.37
GHDC-209ENST00000588762 PLA2G4FQ68DD2 849 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 POTEGQ6S5H5 508 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 CABP7Q86V35 215 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 EXOC8Q8IYI6 725 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 CEP170P1Q96L14 293 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 CSRNP2Q9H175 543 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 CYP26B1Q9NR63 512 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 CHMP5Q9NZZ3 219 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 PPME1Q9Y570 386 aa17.34■□□□□ 0.37
GHDC-209ENST00000588762 SMIM35A0A1B0GVV1 85 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 H0YGN5 161 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 C22orf31O95567 290 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 TMOD1P28289 359 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 CYP2C18P33260 490 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 TXLNAP40222 546 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 THPOP40225 353 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 NPEPPSP55786 919 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 GRIN1Q05586 938 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 RUFY4Q6ZNE9 571 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 METTL13Q8N6R0 699 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 RASSF8Q8NHQ8 419 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 PIGOQ8TEQ8 1089 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 DHX38Q92620 1227 aaKnown RBP17.33■□□□□ 0.36
GHDC-209ENST00000588762 ZBTB10Q96DT7 871 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 CALML4Q96GE6 196 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 SPATA32Q96LK8 384 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 JPH2Q9BR39 696 aaPredicted RBP17.33■□□□□ 0.36
GHDC-209ENST00000588762 SH2D3AQ9BRG2 576 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 MMTAG2Q9BU76 263 aaKnown RBP17.33■□□□□ 0.36
GHDC-209ENST00000588762 NT5C3AQ9H0P0 336 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 DDX19AQ9NUU7 478 aaKnown RBP17.33■□□□□ 0.36
GHDC-209ENST00000588762 RCOR1Q9UKL0 485 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 KIAA1024Q9UPX6 916 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 DNM3Q9UQ16 869 aa17.33■□□□□ 0.36
GHDC-209ENST00000588762 ZBTB39O15060 712 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 CUTAO60888 179 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 CAND2O75155 1236 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 CKBP12277 381 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 RFC5P40937 340 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 ME1P48163 572 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 DNM2P50570 870 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 POLGP54098 1239 aaPredicted RBP17.32■□□□□ 0.36
GHDC-209ENST00000588762 RBL2Q08999 1139 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 TRIM71Q2Q1W2 868 aaKnown RBP17.32■□□□□ 0.36
GHDC-209ENST00000588762 EFCAB12Q6NXP0 572 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 TMEM199Q8N511 208 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 KCTD17Q8N5Z5 321 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 DNAJB3Q8WWF6 145 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 SLC7A3Q8WY07 619 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 CLIC6Q96NY7 704 aa17.32■□□□□ 0.36
GHDC-209ENST00000588762 SCAND2PQ9GZW5 306 aaPredicted RBP17.32■□□□□ 0.36
GHDC-209ENST00000588762 FAM49AQ9H0Q0 323 aaPredicted RBP17.32■□□□□ 0.36
GHDC-209ENST00000588762 DBR1Q9UK59 544 aaKnown RBP17.32■□□□□ 0.36
GHDC-209ENST00000588762 SCN5AQ14524 2016 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 A0A087WWV3 80 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 ARHGEF35A5YM69 484 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 SELPP16109 830 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 CCL23P55773 120 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 ECM1Q16610 540 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 SPECC1Q5M775 1068 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 HYIQ5T013 277 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 MFSD5Q6N075 450 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 LRRC8DQ7L1W4 858 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 RPAINQ86UA6 219 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 NME8Q8N427 588 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 WNT8BQ93098 351 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 MAP7D2Q96T17 732 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 SUGCTQ9HAC7 445 aa17.31■□□□□ 0.36
GHDC-209ENST00000588762 UMODL1Q5DID0 1318 aa17.3■□□□□ 0.36
GHDC-209ENST00000588762 M0QZ92 97 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms