RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 FPGSQ05932 587 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 TTLL4Q14679 1199 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 PPP2R5BQ15173 497 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 NECTIN1Q15223 517 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 STXBP2Q15833 593 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 PTPROQ16827 1216 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 FAM109BQ6ICB4 259 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 MFSD5Q6N075 450 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 CHST3Q7LGC8 479 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 MB21D2Q8IYB1 491 aaPredicted RBP11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 MRFAP1L1Q96HT8 127 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 SEC16BQ96JE7 1060 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 TMEM87BQ96K49 555 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 RMDN3Q96TC7 470 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 PCDHA1Q9Y5I3 950 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 TAF6LQ9Y6J9 622 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
HNRNPC-228ENST00000557033 CFBP00751 764 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 HSD17B4P51659 736 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 ANTXR2P58335 489 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 SERINC3Q13530 473 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 C9orf50Q5SZB4 431 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 ARHGEF16Q5VV41 709 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 CASC1Q6TDU7 716 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 TMEM199Q8N511 208 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 DEFB123Q8N688 67 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 OR6J1Q8NGC5 347 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 MTG1Q9BT17 334 aaPredicted RBP11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 SENP2Q9HC62 589 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 COL20A1Q9P218 1284 aa11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 MRPL42Q9Y6G3 142 aaKnown RBP11.34□□□□□ -0.59
HNRNPC-228ENST00000557033 SZT2Q5T011 3432 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 SLC27A2O14975 620 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 PRC1O43663 620 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 CYTH3O43739 400 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 PPP1R11O60927 126 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 CLSTN1O94985 981 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 SUPT20HL2P0C7V6 817 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 CALM1P0DP23 149 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 CALM2P0DP24 149 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 CALM3P0DP25 149 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 PTGS1P23219 599 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 KIF5BP33176 963 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 LIFRP42702 1097 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 PTGIRP43119 386 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 GNAQP50148 359 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 SMAD3P84022 425 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 PURAQ00577 322 aaKnown RBP11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 CREB3L3Q68CJ9 461 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 CCDC62Q6P9F0 684 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 NXPE4Q6UWF7 544 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 CTCFLQ8NI51 663 aaPredicted RBP11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 KCNB2Q92953 911 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 PIGSQ96S52 555 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 LZTS2Q9BRK4 669 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 LY9Q9HBG7 655 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
HNRNPC-228ENST00000557033 TGFBR3LH3BV60 316 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 GCOM1H8Y6P7 765 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 K7ELQ4 463 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 DDAH1O94760 285 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 MYL3P08590 195 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 POLR2MP0CAP2 368 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 EPHB4P54760 987 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 IGBP1P78318 339 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 PPIGQ13427 754 aaKnown RBP eCLIP11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 HIF1AQ16665 826 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 SLC35G1Q2M3R5 365 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 KCNV1Q6PIU1 500 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 SEPT14Q6ZU15 432 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 HOMER1Q86YM7 354 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 SNX29Q8TEQ0 813 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 KBTBD4Q9NVX7 518 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 MTMR10Q9NXD2 777 aa11.32□□□□□ -0.6
HNRNPC-228ENST00000557033 CCDC69A6NI79 296 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 MEN1O00255 615 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 SH2B2O14492 632 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 MARCH6O60337 910 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 B4GALT4O60513 344 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 ARIH2O95376 493 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 GH1P01241 217 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 TGFB3P10600 412 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 EIF2AK2P19525 551 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 PSMC6P62333 389 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 LAMC2Q13753 1193 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 NFRKBQ6P4R8 1299 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 NFXL1Q6ZNB6 911 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 VSIG10LQ86VR7 867 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 RHBDD1Q8TEB9 315 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 COPS5Q92905 334 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 RNPC3Q96LT9 517 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 PDCD2LQ9BRP1 358 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 RSRP1Q9BUV0 290 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 SPZ1Q9BXG8 430 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 BCO2Q9BYV7 579 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 TRPV6Q9H1D0 765 aa11.31□□□□□ -0.6
HNRNPC-228ENST00000557033 ALDH8A1Q9H2A2 487 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms