RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 P2RX5Q93086 422 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 ZNF577Q9BSK1 485 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 C11orf84Q9BUA3 381 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-203ENST00000554074 PLVAPQ9BX97 442 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 C22orf23Q9BZE7 217 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 TM6SF1Q9BZW5 370 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 FAM49AQ9H0Q0 323 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-203ENST00000554074 NSUN3Q9H649 340 aaKnown RBP7.5□□□□□ -1.21
SLIRP-203ENST00000554074 UBE2ZQ9H832 354 aaPredicted RBP7.5□□□□□ -1.21
SLIRP-203ENST00000554074 ZSWIM6Q9HCJ5 1215 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 ZNF302Q9NR11 478 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 TCEAL9Q9UHQ7 104 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 CEP131Q9UPN4 1083 aa7.5□□□□□ -1.21
SLIRP-203ENST00000554074 WDR64B1ANS9 1081 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 ZBTB42B2RXF5 422 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 MAGEB2O15479 319 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 PSAPP07602 524 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 ATP4AP20648 1035 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 COL9A1P20849 921 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 CD52P31358 61 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 CTNNB1P35222 781 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 PAK2Q13177 524 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 BTG3Q14201 252 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-203ENST00000554074 GALNT17Q6IS24 598 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 SWSAP1Q6NVH7 229 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 RTN4RL1Q86UN2 441 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-203ENST00000554074 TRIM22Q8IYM9 498 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 KIAA0319LQ8IZA0 1049 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 NEK9Q8TD19 979 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 TRAPPC12Q8WVT3 735 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 PHKBQ93100 1093 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 LENG9Q96B70 501 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 ZBTB10Q96DT7 871 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 PABPC5Q96DU9 382 aaKnown RBP7.49□□□□□ -1.21
SLIRP-203ENST00000554074 ZNF274Q96GC6 653 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-203ENST00000554074 FAM167AQ96KS9 214 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 NECAB3Q96P71 396 aaPredicted RBP7.49□□□□□ -1.21
SLIRP-203ENST00000554074 RIT2Q99578 217 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 C1QTNF1Q9BXJ1 281 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 ERVK-5Q9HDB9 667 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 C1orf112Q9NSG2 853 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 PADI3Q9ULW8 664 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 PCDHA10Q9Y5I2 948 aa7.49□□□□□ -1.21
SLIRP-203ENST00000554074 RBAK-RBAKDNI3L0D1 243 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 M0R2N6 131 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 DDX39AO00148 427 aaKnown RBP7.48□□□□□ -1.21
SLIRP-203ENST00000554074 ADAMTS3O15072 1205 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 GPR182O15218 404 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 DEXIO95424 95 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 C22orf31O95567 290 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 MMP1P03956 469 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 SFNP31947 248 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 SARSP49591 514 aaKnown RBP7.48□□□□□ -1.21
SLIRP-203ENST00000554074 TMEM62Q0P6H9 643 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 TOB2Q14106 344 aaPredicted RBP7.48□□□□□ -1.21
SLIRP-203ENST00000554074 PRR16Q569H4 304 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 MOXD1Q6UVY6 613 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 LINC01465Q8N7H1 131 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 DAGLBQ8NCG7 672 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 RDM1Q8NG50 284 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.48□□□□□ -1.21
SLIRP-203ENST00000554074 SLC5A5Q92911 643 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 SLC26A6Q9BXS9 759 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 TMX1Q9H3N1 280 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 FAM50BQ9Y247 325 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 CYP46A1Q9Y6A2 500 aa7.48□□□□□ -1.21
SLIRP-203ENST00000554074 CYP3A7-CYP3A51PA0A087WV96 503 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 GRXCR2A6NFK2 248 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 CPLX1O14810 134 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 MSH4O15457 936 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 EDIL3O43854 480 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 RPS6KA5O75582 802 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 KCNA5P22460 613 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 CYP3A7P24462 503 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 TMOD1P28289 359 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 JAK3P52333 1124 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 CRYBB1P53674 252 aaPredicted RBP7.47□□□□□ -1.21
SLIRP-203ENST00000554074 NLRP5P59047 1200 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 CCT2P78371 535 aaKnown RBP7.47□□□□□ -1.21
SLIRP-203ENST00000554074 SSRP1Q08945 709 aaKnown RBP7.47□□□□□ -1.21
SLIRP-203ENST00000554074 CTC1Q2NKJ3 1217 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 Q4G0T1 1027 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 TCEAL5Q5H9L2 206 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 PTCRAQ6ISU1 281 aaPredicted RBP7.47□□□□□ -1.21
SLIRP-203ENST00000554074 CPLX2Q6PUV4 134 aaKnown RBP7.47□□□□□ -1.21
SLIRP-203ENST00000554074 SLC24A5Q71RS6 500 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 FAM178BQ8IXR5 827 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 CKAP2LQ8IYA6 745 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 RASGRP4Q8TDF6 673 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 MBOAT7Q96N66 472 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 ELAC1Q9H777 363 aaKnown RBP7.47□□□□□ -1.21
SLIRP-203ENST00000554074 NCOA5Q9HCD5 579 aaKnown RBP7.47□□□□□ -1.21
SLIRP-203ENST00000554074 DISC1Q9NRI5 854 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 RGS18Q9NS28 235 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 VPS54Q9P1Q0 977 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 GABBR1Q9UBS5 961 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 PRKAG3Q9UGI9 489 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 PCDHA4Q9UN74 947 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 PLAGL2Q9UPG8 496 aa7.47□□□□□ -1.21
SLIRP-203ENST00000554074 NOC2LQ9Y3T9 749 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms