RNA–Protein interactions for RNA: ENST00000509784.1

CALCOCO2-216, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 4

Gene CALCOCO2, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-216ENST00000509784 PCDHGA12O60330 932 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PRPF6O94906 941 aaKnown RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 CT47B1P0C2W7 299 aaPredicted RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PTGS1P23219 599 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 MC3RP41968 323 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 RECQLP46063 649 aaPredicted RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 NCKAP1LP55160 1127 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 NKX3-2P78367 333 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PFKPQ01813 784 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 MYBPC3Q14896 1274 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 ODF1Q14990 250 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 UGT8Q16880 541 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 CR1LQ2VPA4 569 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 TOR2AQ5JU69 321 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 VASNQ6EMK4 673 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 SLFN12LQ6IEE8 588 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 CCDC62Q6P9F0 684 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 LIPIQ6XZB0 460 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 ZC3H18Q86VM9 953 aaKnown RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PROSER1Q86XN7 944 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 MYO1HQ8N1T3 1032 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 JPH3Q8WXH2 748 aaPredicted RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 FERMT2Q96AC1 680 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 E2F7Q96AV8 911 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 EAF2Q96CJ1 260 aaPredicted RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 MAML3Q96JK9 1138 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 ACAP3Q96P50 834 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 SYT3Q9BQG1 590 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 MYL10Q9BUA6 226 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 SLC13A1Q9BZW2 595 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 QRSL1Q9H0R6 528 aaKnown RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 CDH19Q9H159 772 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 ZNF552Q9H707 407 aaPredicted RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 KCNK12Q9HB15 430 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 CCM2LQ9NUG4 571 aaPredicted RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 DNAJC28Q9NX36 388 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 SIRT5Q9NXA8 310 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 EDARQ9UNE0 448 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PCDHGA9Q9Y5G4 932 aaKnown RBP4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PCDHGA8Q9Y5G5 932 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PCDHGA7Q9Y5G6 932 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PCDHGA6Q9Y5G7 932 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PCDHGA3Q9Y5H0 932 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PCDHGA2Q9Y5H1 932 aa4.14□□□□□ -1.75
CALCOCO2-216ENST00000509784 PRSS38A1L453 326 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 ZNF503-AS2A6NEH8 195 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 TRIM75PA6NK02 468 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 ZNF839A8K0R7 811 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 ABLIM3O94929 683 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 PAPLNO95428 1278 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 MPIG6BO95866 241 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 PRLP01236 227 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 LPLP06858 475 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 CENPBP07199 599 aaPredicted RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 NCAM1P13591 858 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 ENPP1P22413 925 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 THBS2P35442 1172 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 RGS3P49796 1198 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 MANFP55145 182 aaKnown RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 SRSF2Q01130 221 aaKnown RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 ALDH6A1Q02252 535 aaKnown RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 ROM1Q03395 351 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 CACNB2Q08289 660 aaPredicted RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 ADCY2Q08462 1091 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 MOGSQ13724 837 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 FSCN1Q16658 493 aaKnown RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 ZBTB41Q5SVQ8 909 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 PHF19Q5T6S3 580 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 TMEM132EQ6IEE7 984 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 LRSAM1Q6UWE0 723 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 UNQ6494/PRO21346Q6UXR6 183 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 C14orf80Q86SX3 495 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 STK32CQ86UX6 486 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 FAM168AQ92567 244 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 CCDC136Q96JN2 1154 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 DIRC2Q96SL1 478 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 FOXB1Q99853 325 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 AMNQ9BXJ7 453 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 RHOBTB2Q9BYZ6 727 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 NSUN3Q9H649 340 aaKnown RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 NGRNQ9NPE2 291 aaKnown RBP4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 INCENPQ9NQS7 918 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 HSPBP1Q9NZL4 362 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 WASF3Q9UPY6 502 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 INVSQ9Y283 1065 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 PPP2R3BQ9Y5P8 575 aa4.13□□□□□ -1.75
CALCOCO2-216ENST00000509784 MROH2BQ7Z745 1585 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 ST20-MTHFSA0A0A6YYL1 179 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 HRKO00198 91 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 PRPF3O43395 683 aaKnown RBP4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 C8BP07358 591 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 PF4V1P10720 104 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 OSMP13725 252 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 ATF3P18847 181 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 FBLN1P23142 703 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 ECE1P42892 770 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 GLRBP48167 497 aa4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 NOLC1Q14978 699 aaKnown RBP eCLIP4.12□□□□□ -1.75
CALCOCO2-216ENST00000509784 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms